Advances and Challenges in Metatranscriptomic Analysis

by Migun Shakya, Chien-Chi Lo, Patrick S. G. Chain
Published 2019-09-01

Improved yield of high molecular weight DNA coincides with increased microbial diversity access from iron oxide cemented sub-surface clay environments.

by Richard A Hurt, Michael S Robeson, Migun Shakya, James G Moberly, Tatiana A Vishnivetskaya, Baohua Gu, Dwayne A Elias
Published 2014-01-01

A Gene Cluster That Encodes Histone Deacetylase Inhibitors Contributes to Bacterial Persistence and Antibiotic Tolerance in Burkholderia thailandensis

by Sofiya N. Micheva-Viteva, Migun Shakya, Samantha H. Adikari, Cheryl D. Gleasner, Nileena Velappan, Judith R. Mourant, Patrick S. G. Chain, Elizabeth Hong-Geller
Published 2020-02-01

A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees.

by Migun Shakya, Neil Gottel, Hector Castro, Zamin K Yang, Lee Gunter, Jessy Labbé, Wellington Muchero, Gregory Bonito, Rytas Vilgalys, Gerald Tuskan, Mircea Podar, Christopher W Schadt
Published 2013-01-01

Comparative genomic and phenotypic characterization of invasive non-typhoidal Salmonella isolates from Siaya, Kenya.

by Jessica Z Kubicek-Sutherland, Gary Xie, Migun Shakya, Priya K Dighe, Lindsey L Jacobs, Hajnalka Daligault, Karen Davenport, Loreen R Stromberg, Zachary R Stromberg, Qiuying Cheng, Prakasha Kempaiah, John Michael Ong'echa, Vincent Otieno, Evans Raballah, Samuel Anyona, Collins Ouma, Patrick S G Chain, Douglas J Perkins, Harshini Mukundan, Benjamin H McMahon, Norman A Doggett
Published 2021-02-01

NCBI’s Virus Discovery Hackathon: Engaging Research Communities to Identify Cloud Infrastructure Requirements

by Ryan Connor, Rodney Brister, Jan P. Buchmann, Ward Deboutte, Rob Edwards, Joan Martí-Carreras, Mike Tisza, Vadim Zalunin, Juan Andrade-Martínez, Adrian Cantu, Michael D’Amour, Alexandre Efremov, Lydia Fleischmann, Laura Forero-Junco, Sanzhima Garmaeva, Melissa Giluso, Cody Glickman, Margaret Henderson, Benjamin Kellman, David Kristensen, Carl Leubsdorf, Kyle Levi, Shane Levi, Suman Pakala, Vikas Peddu, Alise Ponsero, Eldred Ribeiro, Farrah Roy, Lindsay Rutter, Surya Saha, Migun Shakya, Ryan Shean, Matthew Miller, Benjamin Tully, Christopher Turkington, Ken Youens-Clark, Bert Vanmechelen, Ben Busby
Published 2019-09-01

NCBI’s Virus Discovery Codeathon: Building “FIVE” —The Federated Index of Viral Experiments API Index

by Joan Martí-Carreras, Alejandro Rafael Gener, Sierra D. Miller, Anderson F. Brito, Christiam E. Camacho, Ryan Connor, Ward Deboutte, Cody Glickman, David M. Kristensen, Wynn K. Meyer, Sejal Modha, Alexis L. Norris, Surya Saha, Anna K. Belford, Evan Biederstedt, James Rodney Brister, Jan P. Buchmann, Nicholas P. Cooley, Robert A. Edwards, Kiran Javkar, Michael Muchow, Harihara Subrahmaniam Muralidharan, Charles Pepe-Ranney, Nidhi Shah, Migun Shakya, Michael J. Tisza, Benjamin J. Tully, Bert Vanmechelen, Valerie C. Virta, Jake L. Weissman, Vadim Zalunin, Alexandre Efremov, Ben Busby
Published 2020-12-01