Propensity Score Method for Partially Matched Omics Studies

by Pei-Fen Kuan
Published 2014-01-01

RNAAgeCalc: A multi-tissue transcriptional age calculator.

by Xu Ren, Pei Fen Kuan
Published 2020-01-01

Negative binomial additive model for RNA-Seq data analysis

by Xu Ren, Pei-Fen Kuan
Published 2020-05-01

Multivariate Boosting for Integrative Analysis of High-Dimensional Cancer Genomic Data

by Lie Xiong, Pei-Fen Kuan, Jianan Tian, Sunduz Keles, Sijian Wang
Published 2014-01-01

Multivariate Boosting for Integrative Analysis of High-Dimensional Cancer Genomic Data

by Lie Xiong, Pei-Fen Kuan, Jianan Tian, Sunduz Keles, Sijian Wang
Published 2015-11-01

Multiple-kernel learning for genomic data mining and prediction

by Christopher M. Wilson, Kaiqiao Li, Xiaoqing Yu, Pei-Fen Kuan, Xuefeng Wang
Published 2019-08-01

A systematic evaluation of nucleotide properties for CRISPR sgRNA design

by Pei Fen Kuan, Scott Powers, Shuyao He, Kaiqiao Li, Xiaoyu Zhao, Bo Huang
Published 2017-06-01

Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq data.

by Dongjun Chung, Pei Fen Kuan, Bo Li, Rajendran Sanalkumar, Kun Liang, Emery H Bresnick, Colin Dewey, Sündüz Keleş
Published 2011-07-01

PTSD is associated with accelerated transcriptional aging in World Trade Center responders

by Pei-Fen Kuan, Xu Ren, Sean Clouston, Xiaohua Yang, Katherine Jonas, Roman Kotov, Evelyn Bromet, Benjamin J. Luft
Published 2021-05-01

Mapping the transcriptomics landscape of post-traumatic stress disorder symptom dimensions in World Trade Center responders

by Pei-Fen Kuan, Xiaohua Yang, Xu Ren, Chang Che, Monika Waszczuk, Roman Kotov, Sean Clouston, Prashant K. Singh, Sean T. Glenn, Eduardo Cortes Gomez, Jianmin Wang, Evelyn Bromet, Benjamin J. Luft
Published 2021-05-01

Metabolomic profiling reveals mitochondrial-derived lipid biomarkers that drive obesity-associated inflammation.

by Brante P Sampey, Alex J Freemerman, Jimmy Zhang, Pei-Fen Kuan, Joseph A Galanko, Thomas M O'Connell, Olga R Ilkayeva, Michael J Muehlbauer, Robert D Stevens, Christopher B Newgard, Heather A Brauer, Melissa A Troester, Liza Makowski
Published 2012-01-01

Application of multiplexed kinase inhibitor beads to study kinome adaptations in drug-resistant leukemia.

by Matthew J Cooper, Nathan J Cox, Eric I Zimmerman, Brian J Dewar, James S Duncan, Martin C Whittle, Thien A Nguyen, Lauren S Jones, Sreerupa Ghose Roy, David M Smalley, Pei Fen Kuan, Kristy L Richards, Richard I Christopherson, Jian Jin, Stephen V Frye, Gary L Johnson, Albert S Baldwin, Lee M Graves
Published 2013-01-01

Inhibition of Lapatinib-Induced Kinome Reprogramming in ERBB2-Positive Breast Cancer by Targeting BET Family Bromodomains

by Timothy J. Stuhlmiller, Samantha M. Miller, Jon S. Zawistowski, Kazuhiro Nakamura, Adriana S. Beltran, James S. Duncan, Steven P. Angus, Kyla A.L. Collins, Deborah A. Granger, Rachel A. Reuther, Lee M. Graves, Shawn M. Gomez, Pei-Fen Kuan, Joel S. Parker, Xin Chen, Noah Sciaky, Lisa A. Carey, H. Shelton Earp, Jian Jin, Gary L. Johnson
Published 2015-04-01

Epigenome-wide meta-analysis of PTSD across 10 military and civilian cohorts identifies methylation changes in AHRR

by Alicia K. Smith, Andrew Ratanatharathorn, Adam X. Maihofer, Robert K. Naviaux, Allison E. Aiello, Ananda B. Amstadter, Allison E. Ashley-Koch, Dewleen G. Baker, Jean C. Beckham, Marco P. Boks, Evelyn Bromet, Michelle Dennis, Sandro Galea, Melanie E. Garrett, Elbert Geuze, Guia Guffanti, Michael A. Hauser, Seyma Katrinli, Varun Kilaru, Ronald C. Kessler, Nathan A. Kimbrel, Karestan C. Koenen, Pei-Fen Kuan, Kefeng Li, Mark W. Logue, Adriana Lori, Benjamin J. Luft, Mark W. Miller, Jane C. Naviaux, Nicole R. Nugent, Xuejun Qin, Kerry J. Ressler, Victoria B. Risbrough, Bart P. F. Rutten, Murray B. Stein, Robert J. Ursano, Eric Vermetten, Christiaan H. Vinkers, Lin Wang, Nagy A. Youssef, INTRuST Clinical Consortium, VA Mid-Atlantic MIRECC Workgroup, PGC PTSD Epigenetics Workgroup, Monica Uddin, Caroline M. Nievergelt
Published 2020-11-01