metaVaR: Introducing metavariant species models for reference-free metagenomic-based population genomics.

by Romuald Laso-Jadart, Christophe Ambroise, Pierre Peterlongo, Mohammed-Amin Madoui
Published 2020-01-01

Finding all maximal perfect haplotype blocks in linear time

by Jarno Alanko, Hideo Bannai, Bastien Cazaux, Pierre Peterlongo, Jens Stoye
Published 2020-02-01

StrainFLAIR: strain-level profiling of metagenomic samples using variation graphs

by Kévin Da Silva, Nicolas Pons, Magali Berland, Florian Plaza Oñate, Mathieu Almeida, Pierre Peterlongo
Published 2021-08-01

Multiple comparative metagenomics using multiset k-mer counting

by Gaëtan Benoit, Pierre Peterlongo, Mahendra Mariadassou, Erwan Drezen, Sophie Schbath, Dominique Lavenier, Claire Lemaitre
Published 2016-11-01

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics

by Jérémy Gauthier, Charlotte Mouden, Tomasz Suchan, Nadir Alvarez, Nils Arrigo, Chloé Riou, Claire Lemaitre, Pierre Peterlongo
Published 2020-06-01

Investigating population‐scale allelic differential expression in wild populations of Oithona similis (Cyclopoida, Claus, 1866)

by Romuald Laso‐Jadart, Kevin Sugier, Emmanuelle Petit, Karine Labadie, Pierre Peterlongo, Christophe Ambroise, Patrick Wincker, Jean‐Louis Jamet, Mohammed‐Amin Madoui
Published 2020-08-01

Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes

by Laetitia Guillot, Ludovic Delage, Alain Viari, Yves Vandenbrouck, Emmanuelle Com, Andrés Ritter, Régis Lavigne, Dominique Marie, Pierre Peterlongo, Philippe Potin, Charles Pineau
Published 2019-01-01

A de novo approach to disentangle partner identity and function in holobiont systems

by Arnaud Meng, Camille Marchet, Erwan Corre, Pierre Peterlongo, Adriana Alberti, Corinne Da Silva, Patrick Wincker, Eric Pelletier, Ian Probert, Johan Decelle, Stéphane Le Crom, Fabrice Not, Lucie Bittner
Published 2018-06-01

Cytosine methylation of mature microRNAs inhibits their functions and is associated with poor prognosis in glioblastoma multiforme

by Mathilde Cheray, Amandine Etcheverry, Camille Jacques, Romain Pacaud, Gwenola Bougras-Cartron, Marc Aubry, Florent Denoual, Pierre Peterlongo, Arulraj Nadaradjane, Joséphine Briand, Farida Akcha, Dominique Heymann, François M. Vallette, Jean Mosser, Benjamin Ory, Pierre-François Cartron
Published 2020-02-01