Interactive SARS-CoV-2 mutation timemaps [version 2; peer review: 1 approved, 2 approved with reservations]

by René L. Warren, Inanc Birol
Published 2021-06-01

Targeted assembly of short sequence reads.

by René L Warren, Robert A Holt
Published 2011-01-01

ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers

by Lauren Coombe, Jessica Zhang, Benjamin P. Vandervalk, Justin Chu, Shaun D. Jackman, Inanc Birol, René L. Warren
Published 2018-06-01

Spaced Seed Data Structures for De Novo Assembly

by Inanç Birol, Justin Chu, Hamid Mohamadi, Shaun D. Jackman, Karthika Raghavan, Benjamin P. Vandervalk, Anthony Raymond, René L. Warren
Published 2015-01-01

Brain microbial populations in HIV/AIDS: α-proteobacteria predominate independent of host immune status.

by William G Branton, Kristofor K Ellestad, Ferdinand Maingat, B Matt Wheatley, Erling Rud, René L Warren, Robert A Holt, Michael G Surette, Christopher Power
Published 2013-01-01

The sensitivity of massively parallel sequencing for detecting candidate infectious agents associated with human tissue.

by Richard A Moore, René L Warren, J Douglas Freeman, Julia A Gustavsen, Caroline Chénard, Jan M Friedman, Curtis A Suttle, Yongjun Zhao, Robert A Holt
Published 2011-01-01

Tigmint: correcting assembly errors using linked reads from large molecules

by Shaun D. Jackman, Lauren Coombe, Justin Chu, Rene L. Warren, Benjamin P. Vandervalk, Sarah Yeo, Zhuyi Xue, Hamid Mohamadi, Joerg Bohlmann, Steven J.M. Jones, Inanc Birol
Published 2018-10-01

Recurrent tumor-specific regulation of alternative polyadenylation of cancer-related genes

by Zhuyi Xue, René L. Warren, Ewan A. Gibb, Daniel MacMillan, Johnathan Wong, Readman Chiu, S. Austin Hammond, Chen Yang, Ka Ming Nip, Catherine A. Ennis, Abigail Hahn, Sheila Reynolds, Inanc Birol
Published 2018-07-01

Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics' GemCode Sequencing Data.

by Lauren Coombe, René L Warren, Shaun D Jackman, Chen Yang, Benjamin P Vandervalk, Richard A Moore, Stephen Pleasance, Robin J Coope, Joerg Bohlmann, Robert A Holt, Steven J M Jones, Inanc Birol
Published 2016-01-01

The North American bullfrog draft genome provides insight into hormonal regulation of long noncoding RNA

by S. Austin Hammond, René L. Warren, Benjamin P. Vandervalk, Erdi Kucuk, Hamza Khan, Ewan A. Gibb, Pawan Pandoh, Heather Kirk, Yongjun Zhao, Martin Jones, Andrew J. Mungall, Robin Coope, Stephen Pleasance, Richard A. Moore, Robert A. Holt, Jessica M. Round, Sara Ohora, Branden V. Walle, Nik Veldhoen, Caren C. Helbing, Inanc Birol
Published 2017-11-01

The Genome of the Northern Sea Otter (Enhydra lutris kenyoni)

by Samantha J. Jones, Martin Haulena, Gregory A. Taylor, Simon Chan, Steven Bilobram, René L. Warren, S. Austin Hammond, Karen L. Mungall, Caleb Choo, Heather Kirk, Pawan Pandoh, Adrian Ally, Noreen Dhalla, Angela K. Y. Tam, Armelle Troussard, Daniel Paulino, Robin J. N. Coope, Andrew J. Mungall, Richard Moore, Yongjun Zhao, Inanc Birol, Yussanne Ma, Marco Marra, Steven J. M. Jones
Published 2017-12-01

The Genome of the Beluga Whale (Delphinapterus leucas)

by Steven J. M. Jones, Gregory A. Taylor, Simon Chan, René L. Warren, S. Austin Hammond, Steven Bilobram, Gideon Mordecai, Curtis A. Suttle, Kristina M. Miller, Angela Schulze, Amy M. Chan, Samantha J. Jones, Kane Tse, Irene Li, Dorothy Cheung, Karen L. Mungall, Caleb Choo, Adrian Ally, Noreen Dhalla, Angela K. Y. Tam, Armelle Troussard, Heather Kirk, Pawan Pandoh, Daniel Paulino, Robin J. N. Coope, Andrew J. Mungall, Richard Moore, Yongjun Zhao, Inanc Birol, Yussanne Ma, Marco Marra, Martin Haulena
Published 2017-12-01