A trans-acting Variant within the Transcription Factor RIM101 Interacts with Genetic Background to Determine its Regulatory Capacity.

by Timothy Read, Phillip A Richmond, Robin D Dowell
Published 2016-01-01

Detecting Differential Transcription Factor Activity from ATAC-Seq Data

by Ignacio J. Tripodi, Mary A. Allen, Robin D. Dowell
Published 2018-05-01

Combining signal and sequence to detect RNA polymerase initiation in ATAC-seq data.

by Ignacio J Tripodi, Murad Chowdhury, Margaret Gruca, Robin D Dowell
Published 2020-01-01

sizzled function and secreted factor network dynamics

by Jianli Shi, Huarong Zhang, Robin D. Dowell, Michael W. Klymkowsky
Published 2012-02-01

Automated discovery of functional generality of human gene expression programs.

by Georg K Gerber, Robin D Dowell, Tommi S Jaakkola, David K Gifford
Published 2007-08-01

Heat shock in C. elegans induces downstream of gene transcription and accumulation of double-stranded RNA.

by Marko Melnick, Patrick Gonzales, Joseph Cabral, Mary A Allen, Robin D Dowell, Christopher D Link
Published 2019-01-01

Transcription factor enrichment analysis (TFEA) quantifies the activity of multiple transcription factors from a single experiment

by Jonathan D. Rubin, Jacob T. Stanley, Rutendo F. Sigauke, Cecilia B. Levandowski, Zachary L. Maas, Jessica Westfall, Dylan J. Taatjes, Robin D. Dowell
Published 2021-06-01

Identification of Mediator Kinase Substrates in Human Cells using Cortistatin A and Quantitative Phosphoproteomics

by Zachary C. Poss, Christopher C. Ebmeier, Aaron T. Odell, Anupong Tangpeerachaikul, Thomas Lee, Henry E. Pelish, Matthew D. Shair, Robin D. Dowell, William M. Old, Dylan J. Taatjes
Published 2016-04-01

Global analysis of p53-regulated transcription identifies its direct targets and unexpected regulatory mechanisms

by Mary Ann Allen, Zdenek Andrysik, Veronica L Dengler, Hestia S Mellert, Anna Guarnieri, Justin A Freeman, Kelly D Sullivan, Matthew D Galbraith, Xin Luo, W Lee Kraus, Robin D Dowell, Joaquin M Espinosa
Published 2014-05-01

Human TFIIH Kinase CDK7 Regulates Transcription-Associated Chromatin Modifications

by Christopher C. Ebmeier, Benjamin Erickson, Benjamin L. Allen, Mary A. Allen, Hyunmin Kim, Nova Fong, Jeremy R. Jacobsen, Kaiwei Liang, Ali Shilatifard, Robin D. Dowell, William M. Old, David L. Bentley, Dylan J. Taatjes
Published 2017-08-01

The MUC5B-associated variant rs35705950 resides within an enhancer subject to lineage- and disease-dependent epigenetic remodeling

by Fabienne Gally, Sarah K. Sasse, Jonathan S. Kurche, Margaret A. Gruca, Jonathan H. Cardwell, Tsukasa Okamoto, Hong W. Chu, Xiaomeng Hou, Olivier B. Poirion, Justin Buchanan, Sebastian Preissl, Bing Ren, Sean P. Colgan, Robin D. Dowell, Ivana V. Yang, David A. Schwartz, Anthony N. Gerber
Published 2021-01-01