Major Histocompatibility Complex Binding, Eluted Ligands, and Immunogenicity: Benchmark Testing and Predictions

by Sinu Paul, Alba Grifoni, Bjoern Peters, Bjoern Peters, Alessandro Sette, Alessandro Sette
Published 2020-02-01

Experimental validation of the RATE tool for inferring HLA restrictions of T cell epitopes

by Sinu Paul, Cecilia S. Lindestam Arlehamn, Veronique Schulten, Luise Westernberg, John Sidney, Bjoern Peters, Alessandro Sette
Published 2017-06-01

Footprints of antigen processing boost MHC class II natural ligand predictions

by Carolina Barra, Bruno Alvarez, Sinu Paul, Alessandro Sette, Bjoern Peters, Massimo Andreatta, Søren Buus, Morten Nielsen
Published 2018-11-01

Automatic Generation of Validated Specific Epitope Sets

by Sebastian Carrasco Pro, John Sidney, Sinu Paul, Cecilia Lindestam Arlehamn, Daniela Weiskopf, Bjoern Peters, Alessandro Sette
Published 2015-01-01

Benchmarking predictions of MHC class I restricted T cell epitopes in a comprehensively studied model system.

by Sinu Paul, Nathan P Croft, Anthony W Purcell, David C Tscharke, Alessandro Sette, Morten Nielsen, Bjoern Peters
Published 2020-05-01

Evaluating the Immunogenicity of Protein Drugs by Applying In Vitro MHC Binding Data and the Immune Epitope Database and Analysis Resource

by Sinu Paul, Ravi V. Kolla, John Sidney, Daniela Weiskopf, Ward Fleri, Yohan Kim, Bjoern Peters, Alessandro Sette
Published 2013-01-01

Allergen and Epitope Targets of Mouse-Specific T Cell Responses in Allergy and Asthma

by Véronique Schulten, Luise Westernberg, Giovanni Birrueta, John Sidney, Sinu Paul, Paula Busse, Bjoern Peters, Bjoern Peters, Alessandro Sette, Alessandro Sette
Published 2018-02-01

Determination of a Predictive Cleavage Motif for Eluted Major Histocompatibility Complex Class II Ligands

by Sinu Paul, Edita Karosiene, Sandeep Kumar Dhanda, Vanessa Jurtz, Lindy Edwards, Morten Nielsen, Morten Nielsen, Alessandro Sette, Alessandro Sette, Bjoern Peters, Bjoern Peters
Published 2018-08-01

Correction: Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses.

by Ricardo da Silva Antunes, Sinu Paul, John Sidney, Daniela Weiskopf, Jennifer M Dan, Elizabeth Phillips, Simon Mallal, Shane Crotty, Alessandro Sette, Cecilia S Lindestam Arlehamn
Published 2018-01-01

Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses.

by Ricardo da Silva Antunes, Sinu Paul, John Sidney, Daniela Weiskopf, Jennifer M Dan, Elizabeth Phillips, Simon Mallal, Shane Crotty, Alessandro Sette, Cecilia S Lindestam Arlehamn
Published 2017-01-01

A Review on T Cell Epitopes Identified Using Prediction and Cell-Mediated Immune Models for Mycobacterium tuberculosis and Bordetella pertussis

by Yuan Tian, Ricardo da Silva Antunes, John Sidney, Cecilia S. Lindestam Arlehamn, Alba Grifoni, Sandeep Kumar Dhanda, Sinu Paul, Bjoern Peters, Bjoern Peters, Daniela Weiskopf, Alessandro Sette, Alessandro Sette
Published 2018-11-01

Predicting HLA CD4 Immunogenicity in Human Populations

by Sandeep Kumar Dhanda, Edita Karosiene, Lindy Edwards, Alba Grifoni, Sinu Paul, Massimo Andreatta, Daniela Weiskopf, John Sidney, Morten Nielsen, Morten Nielsen, Bjoern Peters, Bjoern Peters, Alessandro Sette, Alessandro Sette
Published 2018-06-01

A Quantitative Analysis of Complexity of Human Pathogen-Specific CD4 T Cell Responses in Healthy M. tuberculosis Infected South Africans.

by Cecilia S Lindestam Arlehamn, Denise M McKinney, Chelsea Carpenter, Sinu Paul, Virginie Rozot, Edward Makgotlho, Yolande Gregg, Michele van Rooyen, Joel D Ernst, Mark Hatherill, Willem A Hanekom, Bjoern Peters, Thomas J Scriba, Alessandro Sette
Published 2016-07-01