Blind estimation and correction of microarray batch effect.

by Sudhir Varma
Published 2020-01-01

Regulation of global gene expression in human Loa loa infection is a function of chronicity.

by Cathy Steel, Sudhir Varma, Thomas B Nutman
Published 2012-01-01

Effect of sulfasalazine on insulin resistance and endothelial dysfunction in metabolic syndrome

by Sudhir Varma, Pawan Krishan, Kanchan Vohra, Harpreet Singh Kalra
Published 2015-12-01

High resolution copy number variation data in the NCI-60 cancer cell lines from whole genome microarrays accessible through CellMiner.

by Sudhir Varma, Yves Pommier, Margot Sunshine, John N Weinstein, William C Reinhold
Published 2014-01-01

Diabetes and the COVID-19 Pandemic: What Should the Diabetes Patients Know?

by Moyad Shahwan, Nageeb Hassan, Sahab Alkhoujah, Ammar Jairoun, Samer Zyoud, Sudhir Varma
Published 2020-11-01

Serum progranulin/tumor necrosis factor-α ratio as independent predictor of systolic blood pressure in overweight hypertensive patients: a cross-sectional study

by Jasmine Kaur, Supriya Mukheja, Sudhir Varma, Harpreet Singh Kalra, Bipanjeet Singh Khosa, Kanchan Vohra
Published 2020-05-01

Candidate biomarker assessment for pharmacological response

by William C. Reinhold, Fathi Elloumi, Sudhir Varma, Jacques Robert, Gordon B. Mills, Yves Pommier
Published 2020-10-01

The Effect of Citalopram on Genome-Wide DNA Methylation of Human Cells

by Riya R. Kanherkar, Bruk Getachew, Joseph Ben-Sheetrit, Sudhir Varma, Thomas Heinbockel, Yousef Tizabi, Antonei B. Csoka
Published 2018-01-01

Determination of distinctive hypomethylated genes in African American colorectal neoplastic lesions

by Hassan Ashktorab, Kareem Washington, Shatha Zarnogi, Afnan Shakoori, Sudhir Varma, Edward Lee, Babak Shokrani, Adeyinka Laiyemo, Hassan Brim
Published 2020-05-01

Reduced Representation Bisulfite Sequencing Determination of Distinctive DNA Hypermethylated Genes in the Progression to Colon Cancer in African Americans

by Hassan Ashktorab, Afnan Shakoori, Shatha Zarnogi, Xueguang Sun, Sudhir Varma, Edward Lee, Babak Shokrani, Adeyinka O. Laiyemo, Kareem Washington, Hassan Brim
Published 2016-01-01

Microarray-based analysis of differential gene expression between infective and noninfective larvae of Strongyloides stercoralis.

by Roshan Ramanathan, Sudhir Varma, José M C Ribeiro, Timothy G Myers, Thomas J Nolan, David Abraham, James B Lok, Thomas B Nutman
Published 2011-05-01

Factors influencing prehospital delay in patients presenting with ST-elevation myocardial infarction and the impact of prehospital electrocardiogram

by Bishav Mohan, Raahat Bansal, Naveen Dogra, Sarit Sharma, Arun Chopra, Sudhir Varma, Namita Bansal, Rohit Tandon, Abhishek Goyal, Bhupinder Singh, Shibba Takkar Chhabra, Naved Aslam, Gurpreet S. Wander, Ambuj Roy
Published 2018-12-01

NCI-60 whole exome sequencing and pharmacological CellMiner analyses.

by William C Reinhold, Sudhir Varma, Fabricio Sousa, Margot Sunshine, Ogan D Abaan, Sean R Davis, Spencer W Reinhold, Kurt W Kohn, Joel Morris, Paul S Meltzer, James H Doroshow, Yves Pommier
Published 2014-01-01

Correction: Dysregulation of multiple metabolic networks related to brain transmethylation and polyamine pathways in Alzheimer disease: A targeted metabolomic and transcriptomic st...

by Uma V Mahajan, Vijay R Varma, Michael E Griswold, Chad T Blackshear, Yang An, Anup M Oommen, Sudhir Varma, Juan C Troncoso, Olga Pletnikova, Richard O'Brien, Timothy J Hohman, Cristina Legido-Quigley, Madhav Thambisetty
Published 2020-10-01

Dysregulation of multiple metabolic networks related to brain transmethylation and polyamine pathways in Alzheimer disease: A targeted metabolomic and transcriptomic study.

by Uma V Mahajan, Vijay R Varma, Michael E Griswold, Chad T Blackshear, Yang An, Anup M Oommen, Sudhir Varma, Juan C Troncoso, Olga Pletnikova, Richard O'Brien, Timothy J Hohman, Cristina Legido-Quigley, Madhav Thambisetty
Published 2020-01-01

Abnormal brain cholesterol homeostasis in Alzheimer’s disease—a targeted metabolomic and transcriptomic study

by Vijay R. Varma, H. Büşra Lüleci, Anup M. Oommen, Sudhir Varma, Chad T. Blackshear, Michael E. Griswold, Yang An, Jackson A. Roberts, Richard O’Brien, Olga Pletnikova, Juan C. Troncoso, David A. Bennett, Tunahan Çakır, Cristina Legido-Quigley, Madhav Thambisetty
Published 2021-06-01

A Microbiomic Analysis in African Americans with Colonic Lesions Reveals Streptococcus sp.VT162 as a Marker of Neoplastic Transformation

by Hassan Brim, Shibu Yooseph, Edward Lee, Zaki A. Sherif, Muneer Abbas, Adeyinka O. Laiyemo, Sudhir Varma, Manolito Torralba, Scot E. Dowd, Karen E. Nelson, Wimal Pathmasiri, Susan Sumner, Willem de Vos, Qiaoyi Liang, Jun Yu, Erwin Zoetendal, Hassan Ashktorab
Published 2017-11-01

CellMinerCDB for Integrative Cross-Database Genomics and Pharmacogenomics Analyses of Cancer Cell Lines

by Vinodh N. Rajapakse, Augustin Luna, Mihoko Yamade, Lisa Loman, Sudhir Varma, Margot Sunshine, Francesco Iorio, Fabricio G. Sousa, Fathi Elloumi, Mirit I. Aladjem, Anish Thomas, Chris Sander, Kurt W. Kohn, Cyril H. Benes, Mathew Garnett, William C. Reinhold, Yves Pommier
Published 2018-12-01

SCLC-CellMiner: A Resource for Small Cell Lung Cancer Cell Line Genomics and Pharmacology Based on Genomic Signatures

by Camille Tlemsani, Lorinc Pongor, Fathi Elloumi, Luc Girard, Kenneth E. Huffman, Nitin Roper, Sudhir Varma, Augustin Luna, Vinodh N. Rajapakse, Robin Sebastian, Kurt W. Kohn, Julia Krushkal, Mirit I. Aladjem, Beverly A. Teicher, Paul S. Meltzer, William C. Reinhold, John D. Minna, Anish Thomas, Yves Pommier
Published 2020-10-01

Brain and blood metabolite signatures of pathology and progression in Alzheimer disease: A targeted metabolomics study.

by Vijay R Varma, Anup M Oommen, Sudhir Varma, Ramon Casanova, Yang An, Ryan M Andrews, Richard O'Brien, Olga Pletnikova, Juan C Troncoso, Jon Toledo, Rebecca Baillie, Matthias Arnold, Gabi Kastenmueller, Kwangsik Nho, P Murali Doraiswamy, Andrew J Saykin, Rima Kaddurah-Daouk, Cristina Legido-Quigley, Madhav Thambisetty
Published 2018-01-01