Reassessment of the generic limits for Hydnellum and Sarcodon (Thelephorales, Basidiomycota)

by Karl-Henrik Larsson, Sten Svantesson, Diana Miscevic, Urmas Kõljalg, Ellen Larsson
Published 2019-06-01

Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective.

by R Henrik Nilsson, Martin Ryberg, Erik Kristiansson, Kessy Abarenkov, Karl-Henrik Larsson, Urmas Kõljalg
Published 2006-01-01

Solving the taxonomic identity of Pseudotomentella tristis s.l. (Thelephorales, Basidiomycota) – a multi-gene phylogeny and taxonomic review, integrating ecological and geographica...

by Sten Svantesson, Karl-Henrik Larsson, Urmas Kõljalg, Tom W. May, Patrik Cangren, R. Henrik Nilsson, Ellen Larsson
Published 2019-04-01

Summary report and strategy recommendations for EU citizen science gateway for biodiversity data

by Veljo Runnel, Florian Wetzel, Quentin Groom, Wouter Koch, Israel Pe’er, Nils Valland, Emmanouela Panteri, Urmas Kõljalg
Published 2016-12-01

Aphyllophoroid fungi in insular woodlands of eastern Ukraine

by Alexander Ordynets, Anton Savchenko, Alexander Akulov, Eugene Yurchenko, Vera Malysheva, Urmas Kõljalg, Josef Vlasák, Karl-Henrik Larsson, Ewald Langer
Published 2017-12-01

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

by Leho Tedersoo, Sten Anslan, Mohammad Bahram, Sergei Põlme, Taavi Riit, Ingrid Liiv, Urmas Kõljalg, Veljo Kisand, Henrik Nilsson, Falk Hildebrand, Peer Bork, Kessy Abarenkov
Published 2015-05-01

Tidying up international nucleotide sequence databases: ecological, geographical and sequence quality annotation of its sequences of mycorrhizal fungi.

by Leho Tedersoo, Kessy Abarenkov, R Henrik Nilsson, Arthur Schüssler, Gwen-Aëlle Grelet, Petr Kohout, Jane Oja, Gregory M Bonito, Vilmar Veldre, Teele Jairus, Martin Ryberg, Karl-Henrik Larsson, Urmas Kõljalg
Published 2011-01-01

Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe

by Leho Tedersoo, Sten Anslan, Sten Anslan, Mohammad Bahram, Mohammad Bahram, Rein Drenkhan, Karin Pritsch, Franz Buegger, Allar Padari, Niloufar Hagh-Doust, Vladimir Mikryukov, Daniyal Gohar, Rasekh Amiri, Indrek Hiiesalu, Reimo Lutter, Raul Rosenvald, Elisabeth Rähn, Kalev Adamson, Tiia Drenkhan, Tiia Drenkhan, Hardi Tullus, Katrin Jürimaa, Ivar Sibul, Eveli Otsing, Sergei Põlme, Marek Metslaid, Kaire Loit, Ahto Agan, Rasmus Puusepp, Inge Varik, Urmas Kõljalg, Urmas Kõljalg, Kessy Abarenkov
Published 2020-09-01

PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

by Kessy Abarenkov, Leho Tedersoo, R. Henrik Nilsson, Kai Vellak, Irja Saar, Vilmar Veldre, Erast Parmasto, Marko Prous, Anne Aan, Margus Ots, Olavi Kurina, Ivika Ostonen, Janno Jõgeva, Siim Halapuu, Kadri Põldmaa, Märt Toots, Jaak Truu, Karl-Henrik Larsson, Urmas Kõljalg
Published 2010-01-01

PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

by Kessy Abarenkov, Leho Tedersoo, R. Henrik Nilsson, Kai Vellak, Irja Saar, Vilmar Veldre, Erast Parmasto, Marko Prous, Anne Aan, Margus Ots, Olavi Kurina, Ivika Ostonen, Janno Jõgeva, Siim Halapuu, Kadri Põldmaa, Märt Toots, Jaak Truu, Karl-Henrik Larsson, Urmas Kõljalg
Published 2010-12-01

The need for an integrated biodiversity policy support process – Building the European contribution to a global Biodiversity Observation Network (EU BON)

by Anke Hoffmann, Johannes Penner, Katrin Vohland, Wolfgang Cramer, Robert Doubleday, Klaus Henle, Urmas Kõljalg, Ingolf Kühn, William Kunin, Juan José Negro, Lyubomir Penev, Carlos Rodríguez, Hannu Saarenmaa, Dirk Schmeller, Pavel Stoev, William Sutherland, Éamonn Ó Tuama, Florian Wetzel, Christoph L. Häuser
Published 2014-03-01

Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences

by R. Henrik Nilsson, Leho Tedersoo, Kessy Abarenkov, Martin Ryberg, Erik Kristiansson, Martin Hartmann, Conrad L. Schoch, Johan A. A. Nylander, Johannes Bergsten, Teresita M. Porter, Ari Jumpponen, Parag Vaishampayan, Otso Ovaskainen, Nils Hallenberg, Johan Bengtsson-Palme, K. Martin Eriksson, Karl-Henrik Larsson, Ellen Larsson, Urmas Kõljalg
Published 2012-09-01

The Taxon Hypothesis Paradigm—On the Unambiguous Detection and Communication of Taxa

by Urmas Kõljalg, Henrik R. Nilsson, Dmitry Schigel, Leho Tedersoo, Karl-Henrik Larsson, Tom W. May, Andy F.S. Taylor, Thomas Stjernegaard Jeppesen, Tobias Guldberg Frøslev, Björn D. Lindahl, Kadri Põldmaa, Irja Saar, Ave Suija, Anton Savchenko, Iryna Yatsiuk, Kristjan Adojaan, Filipp Ivanov, Timo Piirmann, Raivo Pöhönen, Allan Zirk, Kessy Abarenkov
Published 2020-11-01

Unifying European Biodiversity Informatics (BioUnify)

by Dimitrios Koureas, Alex Hardisty, Rutger Vos, Donat Agosti, Christos Arvanitidis, Peter Bogatencov, Pier Luigi Buttigieg, Yde de Jong, Ferenc Horvath, Georgios Gkoutos, Quentin Groom, Tomas Kliment, Urmas Kõljalg, Ioannis Manakos, Arnald Marcer, Karol Marhold, David Morse, Patricia Mergen, Lyubomir Penev, Lars Pettersson, Jens-Christian Svenning, Anton van de Putte, Vincent Smith
Published 2016-01-01

Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)

by Kessy Abarenkov, Rachel I. Adams, Irinyi Laszlo, Ahto Agan, Elia Ambrosio, Alexandre Antonelli, Mohammad Bahram, Johan Bengtsson-Palme, Gunilla Bok, Patrik Cangren, Victor Coimbra, Claudia Coleine, Claes Gustafsson, Jinhong He, Tobias Hofmann, Erik Kristiansson, Ellen Larsson, Tomas Larsson, Yingkui Liu, Svante Martinsson, Wieland Meyer, Marina Panova, Nuttapon Pombubpa, Camila Ritter, Martin Ryberg, Sten Svantesson, Ruud Scharn, Ola Svensson, Mats Töpel, Martin Unterseher, Cobus Visagie, Christian Wurzbacher, Andy F.S. Taylor, Urmas Kõljalg, Lynn Schriml, R. Henrik Nilsson
Published 2016-09-01

Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK)

by R. Henrik Nilsson, Andy F. S. Taylor, Rachel I. Adams, Christiane Baschien, Johan Bengtsson-Palme, Patrik Cangren, Claudia Coleine, Heide-Marie Daniel, Sydney I. Glassman, Yuuri Hirooka, Laszlo Irinyi, Reda Iršėnaitė, Pedro M. Martin-Sanchez, Wieland Meyer, Seung-Yoon Oh, Jose Paulo Sampaio, Keith A. Seifert, Frantisek Sklenář, Dirk Stubbe, Sung-Oui Suh, Richard Summerbell, Sten Svantesson, Martin Unterseher, Cobus M. Visagie, Michael Weiss, Joyce HC Woudenberg, Christian Wurzbacher, Silke Van den Wyngaert, Neriman Yilmaz, Andrey Yurkov, Urmas Kõljalg, Kessy Abarenkov
Published 2018-01-01

DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe

by Florian Leese, Florian Altermatt, Agnès Bouchez, Torbjørn Ekrem, Daniel Hering, Kristian Meissner, Patricia Mergen, Jan Pawlowski, Jeremy Piggott, Frédéric Rimet, Dirk Steinke, Pierre Taberlet, Alexander Weigand, Kessy Abarenkov, Pedro Beja, Lieven Bervoets, Snaedís Björnsdóttir, Pieter Boets, Angela Boggero, Atle Bones, Ángel Borja, Kat Bruce, Vojislava Bursić, Jens Carlsson, Fedor Čiampor, Zuzana Čiamporová-Zatovičová, Eric Coissac, Filipe Costa, Marieta Costache, Simon Creer, Zoltán Csabai, Kristy Deiner, Ángel DelValls, Stina Drakare, Sofia Duarte, Tina Eleršek, Stefano Fazi, Cene Fišer, Jean-François Flot, Vera Fonseca, Diego Fontaneto, Michael Grabowski, Wolfram Graf, Jóhannes Guðbrandsson, Micaela Hellström, Yaron Hershkovitz, Peter Hollingsworth, Bella Japoshvili, John Jones, Maria Kahlert, Belma Kalamujic Stroil, Panagiotis Kasapidis, Martyn Kelly, Mary Kelly-Quinn, Emre Keskin, Urmas Kõljalg, Zrinka Ljubešić, Irena Maček, Elvira Mächler, Andrew Mahon, Marketa Marečková, Maja Mejdandzic, Georgina Mircheva, Matteo Montagna, Christian Moritz, Vallo Mulk, Andreja Naumoski, Ion Navodaru, Judit Padisák, Snæbjörn Pálsson, Kristel Panksep, Lyubomir Penev, Adam Petrusek, Martin Pfannkuchen, Craig Primmer, Baruch Rinkevich, Ana Rotter, Astrid Schmidt-Kloiber, Pedro Segurado, Arjen Speksnijder, Pavel Stoev, Malin Strand, Sigitas Šulčius, Per Sundberg, Michael Traugott, Costas Tsigenopoulos, Xavier Turon, Alice Valentini, Berry van der Hoorn, Gábor Várbíró, Marlen Vasquez Hadjilyra, Javier Viguri, Irma Vitonytė, Alfried Vogler, Trude Vrålstad, Wolfgang Wägele, Roman Wenne, Anne Winding, Guy Woodward, Bojana Zegura, Jonas Zimmermann
Published 2016-11-01

Taxonomy based on science is necessary for global conservation.

by Scott A Thomson, Richard L Pyle, Shane T Ahyong, Miguel Alonso-Zarazaga, Joe Ammirati, Juan Francisco Araya, John S Ascher, Tracy Lynn Audisio, Valter M Azevedo-Santos, Nicolas Bailly, William J Baker, Michael Balke, Maxwell V L Barclay, Russell L Barrett, Ricardo C Benine, James R M Bickerstaff, Patrice Bouchard, Roger Bour, Thierry Bourgoin, Christopher B Boyko, Abraham S H Breure, Denis J Brothers, James W Byng, David Campbell, Luis M P Ceríaco, István Cernák, Pierfilippo Cerretti, Chih-Han Chang, Soowon Cho, Joshua M Copus, Mark J Costello, Andras Cseh, Csaba Csuzdi, Alastair Culham, Guillermo D'Elía, Cédric d'Udekem d'Acoz, Mikhail E Daneliya, René Dekker, Edward C Dickinson, Timothy A Dickinson, Peter Paul van Dijk, Klaas-Douwe B Dijkstra, Bálint Dima, Dmitry A Dmitriev, Leni Duistermaat, John P Dumbacher, Wolf L Eiserhardt, Torbjørn Ekrem, Neal L Evenhuis, Arnaud Faille, José L Fernández-Triana, Emile Fiesler, Mark Fishbein, Barry G Fordham, André V L Freitas, Natália R Friol, Uwe Fritz, Tobias Frøslev, Vicki A Funk, Stephen D Gaimari, Guilherme S T Garbino, André R S Garraffoni, József Geml, Anthony C Gill, Alan Gray, Felipe G Grazziotin, Penelope Greenslade, Eliécer E Gutiérrez, Mark S Harvey, Cornelis J Hazevoet, Kai He, Xiaolan He, Stephan Helfer, Kristofer M Helgen, Anneke H van Heteren, Francisco Hita Garcia, Norbert Holstein, Margit K Horváth, Peter H Hovenkamp, Wei Song Hwang, Jaakko Hyvönen, Melissa B Islam, John B Iverson, Michael A Ivie, Zeehan Jaafar, Morgan D Jackson, J Pablo Jayat, Norman F Johnson, Hinrich Kaiser, Bente B Klitgård, Dániel G Knapp, Jun-Ichi Kojima, Urmas Kõljalg, Jenő Kontschán, Frank-Thorsten Krell, Irmgard Krisai-Greilhuber, Sven Kullander, Leonardo Latella, John E Lattke, Valeria Lencioni, Gwilym P Lewis, Marcos G Lhano, Nathan K Lujan, Jolanda A Luksenburg, Jean Mariaux, Jader Marinho-Filho, Christopher J Marshall, Jason F Mate, Molly M McDonough, Ellinor Michel, Vitor F O Miranda, Mircea-Dan Mitroiu, Jesús Molinari, Scott Monks, Abigail J Moore, Ricardo Moratelli, Dávid Murányi, Takafumi Nakano, Svetlana Nikolaeva, John Noyes, Michael Ohl, Nora H Oleas, Thomas Orrell, Barna Páll-Gergely, Thomas Pape, Viktor Papp, Lynne R Parenti, David Patterson, Igor Ya Pavlinov, Ronald H Pine, Péter Poczai, Jefferson Prado, Divakaran Prathapan, Richard K Rabeler, John E Randall, Frank E Rheindt, Anders G J Rhodin, Sara M Rodríguez, D Christopher Rogers, Fabio de O Roque, Kevin C Rowe, Luis A Ruedas, Jorge Salazar-Bravo, Rodrigo B Salvador, George Sangster, Carlos E Sarmiento, Dmitry S Schigel, Stefan Schmidt, Frederick W Schueler, Hendrik Segers, Neil Snow, Pedro G B Souza-Dias, Riaan Stals, Soili Stenroos, R Douglas Stone, Charles F Sturm, Pavel Štys, Pablo Teta, Daniel C Thomas, Robert M Timm, Brian J Tindall, Jonathan A Todd, Dagmar Triebel, Antonio G Valdecasas, Alfredo Vizzini, Maria S Vorontsova, Jurriaan M de Vos, Philipp Wagner, Les Watling, Alan Weakley, Francisco Welter-Schultes, Daniel Whitmore, Nicholas Wilding, Kipling Will, Jason Williams, Karen Wilson, Judith E Winston, Wolfgang Wüster, Douglas Yanega, David K Yeates, Hussam Zaher, Guanyang Zhang, Zhi-Qiang Zhang, Hong-Zhang Zhou
Published 2018-03-01