Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples

Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples

Abstract Background Next generation sequencing (NGS) technology allows laboratories to investigate virome composition in clinical and environmental samples in a culture-independent way. There is a need for bioinformatic tools capable of parallel processing of virome sequencing data by exactly identi...

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Bibliographic Details
Main Authors: Jake Lin, Lenka Kramna, Reija Autio, Heikki Hyöty, Matti Nykter, Ondrej Cinek
Format: Article
Language:English
Published: BMC 2017-05-01
Series:BMC Genomics
Subjects:
Metagenomics
Viromes
Virus
Assembly
NGS analysis
Visualization
Online Access:http://link.springer.com/article/10.1186/s12864-017-3721-7

Internet

http://link.springer.com/article/10.1186/s12864-017-3721-7

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