DOE JGI Metagenome Workflow

DOE JGI Metagenome Workflow

The DOE JGI Metagenome Workflow is designed for processing metagenomic data sets starting from Illumina fastq files. It performs data preprocessing, error correction, assembly, structural and functional annotation, and binning.

Bibliographic Details
Main Authors: Alicia Clum, Marcel Huntemann, Brian Bushnell, Brian Foster, Bryce Foster, Simon Roux, Patrick P. Hajek, Neha Varghese, Supratim Mukherjee, T. B. K. Reddy, Chris Daum, Yuko Yoshinaga, Ronan O’Malley, Rekha Seshadri, Nikos C. Kyrpides, Emiley A. Eloe-Fadrosh, I-Min A. Chen, Alex Copeland, Natalia N. Ivanova
Format: Article
Language:English
Published: American Society for Microbiology 2021-06-01
Series:mSystems
Online Access:https://journals.asm.org/doi/10.1128/mSystems.00804-20

Internet

https://journals.asm.org/doi/10.1128/mSystems.00804-20

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