Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake

by Timothy J. Williams, Michelle A. Allen, Natalia Ivanova, Marcel Huntemann, Sabrina Haque, Alyce M. Hancock, Sarah Brazendale, Ricardo Cavicchioli
Published 2021-06-01

Genome-Based Taxonomic Classification of Bacteroidetes

by Richard L. Hahnke, Jan P. Meier-Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia N. Ivanova, Tanja Woyke, Nikos C. Kyrpides, Nikos C. Kyrpides, Hans-Peter Klenk, Markus Göker
Published 2016-12-01

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes

by Richard L. Hahnke, Jan P. Meier-Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia N. Ivanova, Tanja Woyke, Nikos C. Kyrpides, Nikos C. Kyrpides, Hans-Peter Klenk, Markus Göker
Published 2018-02-01

IMG/M-HMP: a metagenome comparative analysis system for the Human Microbiome Project.

by Victor M Markowitz, I-Min A Chen, Ken Chu, Ernest Szeto, Krishna Palaniappan, Biju Jacob, Anna Ratner, Konstantinos Liolios, Ioanna Pagani, Marcel Huntemann, Konstantinos Mavromatis, Natalia N Ivanova, Nikos C Kyrpides
Published 2012-01-01

Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence.

by Atteyet F Yassin, Stefan Langenberg, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Supratim Mukherjee, T B K Reddy, Chris Daum, Nicole Shapiro, Natalia Ivanova, Tanja Woyke, Nikos C Kyrpides
Published 2017-01-01

Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-...

by Agnieszka Klonowska, Lionel Moulin, Julie Kaye Ardley, Florence Braun, Margaret Mary Gollagher, Jaco Daniel Zandberg, Dora Vasileva Marinova, Marcel Huntemann, T. B. K. Reddy, Neha Jacob Varghese, Tanja Woyke, Natalia Ivanova, Rekha Seshadri, Nikos Kyrpides, Wayne Gerald Reeve
Published 2020-03-01

Insights into the genome of large sulfur bacteria revealed by analysis of single filaments.

by Marc Mussmann, Fen Z Hu, Michael Richter, Dirk de Beer, André Preisler, Bo B Jørgensen, Marcel Huntemann, Frank Oliver Glöckner, Rudolf Amann, Werner J H Koopman, Roger S Lasken, Benjamin Janto, Justin Hogg, Paul Stoodley, Robert Boissy, Garth D Ehrlich
Published 2007-09-01

Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica

by Dong Han Choi, Gwang II Jang, Alla Lapidus, Alex Copeland, T. B. K. Reddy, Supratim Mukherjee, Marcel Huntemann, Neha Varghese, Natalia Ivanova, Manoj Pillay, Brian J. Tindall, Markus Göker, Tanja Woyke, Hans-Peter Klenk, Nikos C. Kyrpides, Byung Cheol Cho
Published 2017-10-01

High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk

by Sivan Laviad-Shitrit, Markus Göker, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B. K. Reddy, Chris Daum, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Tanja Woyke, Hans-Peter Klenk, Nikos C. Kyrpides, Malka Halpern
Published 2017-05-01

Influence of the polar light cycle on seasonal dynamics of an Antarctic lake microbial community

by Pratibha Panwar, Michelle A. Allen, Timothy J. Williams, Alyce M. Hancock, Sarah Brazendale, James Bevington, Simon Roux, David Páez-Espino, Stephen Nayfach, Maureen Berg, Frederik Schulz, I-Min A. Chen, Marcel Huntemann, Nicole Shapiro, Nikos C. Kyrpides, Tanja Woyke, Emiley A. Eloe-Fadrosh, Ricardo Cavicchioli
Published 2020-08-01

Draft genome of Paraburkholderia caballeronis TNe-841T, a free-living, nitrogen-fixing, tomato plant-associated bacterium

by Fernando Uriel Rojas-Rojas, Erika Yanet Tapia-García, Maskit Maymon, Ethan Humm, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B. K. Reddy, Victor Markowitz, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Nicole Shapiro, Ann M. Hirsch, Paulina Estrada-de los Santos
Published 2017-12-01

DOE JGI Metagenome Workflow

by Alicia Clum, Marcel Huntemann, Brian Bushnell, Brian Foster, Bryce Foster, Simon Roux, Patrick P. Hajek, Neha Varghese, Supratim Mukherjee, T. B. K. Reddy, Chris Daum, Yuko Yoshinaga, Ronan O’Malley, Rekha Seshadri, Nikos C. Kyrpides, Emiley A. Eloe-Fadrosh, I-Min A. Chen, Alex Copeland, Natalia N. Ivanova
Published 2021-06-01

Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato

by Chrizelle W. Beukes, Marike Palmer, Puseletso Manyaka, Wai Y. Chan, Juanita R. Avontuur, Elritha van Zyl, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B. K. Reddy, Chris Daum, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Jochen Blom, William B. Whitman, Stephanus N. Venter, Emma T. Steenkamp
Published 2017-06-01

Corrigendum: Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato

by Chrizelle W. Beukes, Marike Palmer, Puseletso Manyaka, Wai Y. Chan, Juanita R. Avontuur, Elritha van Zyl, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B. K. Reddy, Chris Daum, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Jochen Blom, William B. Whitman, Stephanus N. Venter, Emma T. Steenkamp
Published 2018-03-01

Impact of Soil Salinity on the Cowpea Nodule-Microbiome and the Isolation of Halotolerant PGPR Strains to Promote Plant Growth under Salinity Stress

by Salma Mukhtar, Ann M. Hirsch, Noor Khan, Kauser A. Malik, Ethan A. Humm, Matteo Pellegrini, Baochen Shi, Leah Briscoe, Marcel Huntemann, Alicia Clum, Brian Foster, Bryce Foster, Simon Roux, Krishnaveni Palaniappan, Neha Varghese, Supratim Mukherjee, T.B.K. Reddy, Chris Daum, Alex Copeland, Natalia N. Ivanova, Nikos C. Kyrpides, Nicole Shapiro, Emiley A. Eloe-Fadrosh, Maskit Maymon, Muhammad S. Mirza, Samina Mehnaz
Published 2020-08-01

Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan

by Scott C. Thomas, Devon Payne, Kevin O. Tamadonfar, Cale O. Seymour, Jian-Yu Jiao, Jian-Yu Jiao, Senthil K. Murugapiran, Senthil K. Murugapiran, Dengxun Lai, Rebecca Lau, Rebecca Lau, Benjamin P. Bowen, Benjamin P. Bowen, Leslie P. Silva, Leslie P. Silva, Katherine B. Louie, Katherine B. Louie, Marcel Huntemann, Marcel Huntemann, Alicia Clum, Alicia Clum, Alex Spunde, Alex Spunde, Manoj Pillay, Manoj Pillay, Krishnaveni Palaniappan, Krishnaveni Palaniappan, Neha Varghese, Neha Varghese, Natalia Mikhailova, Natalia Mikhailova, I-Min Chen, I-Min Chen, Dimitrios Stamatis, Dimitrios Stamatis, T. B. K. Reddy, T. B. K. Reddy, Ronan O’Malley, Ronan O’Malley, Chris Daum, Chris Daum, Nicole Shapiro, Nicole Shapiro, Natalia Ivanova, Natalia Ivanova, Nikos C. Kyrpides, Nikos C. Kyrpides, Tanja Woyke, Tanja Woyke, Emiley Eloe-Fadrosh, Emiley Eloe-Fadrosh, Trinity L. Hamilton, Paul Dijkstra, Jeremy A. Dodsworth, Trent R. Northen, Trent R. Northen, Wen-Jun Li, Wen-Jun Li, Brian P. Hedlund, Brian P. Hedlund
Published 2021-05-01

The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole

by Kara Martin, Katrin Schmidt, Andrew Toseland, Chris A. Boulton, Kerrie Barry, Bánk Beszteri, Corina P. D. Brussaard, Alicia Clum, Chris G. Daum, Emiley Eloe-Fadrosh, Allison Fong, Brian Foster, Bryce Foster, Michael Ginzburg, Marcel Huntemann, Natalia N. Ivanova, Nikos C. Kyrpides, Erika Lindquist, Supratim Mukherjee, Krishnaveni Palaniappan, T. B. K. Reddy, Mariam R. Rizkallah, Simon Roux, Klaas Timmermans, Susannah G. Tringe, Willem H. van de Poll, Neha Varghese, Klaus U. Valentin, Timothy M. Lenton, Igor V. Grigoriev, Richard M. Leggett, Vincent Moulton, Thomas Mock
Published 2021-09-01

High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460

by Vera Y. Matrosova, Elena K. Gaidamakova, Kira S. Makarova, Olga Grichenko, Polina Klimenkova, Robert P. Volpe, Rok Tkavc, Gözen Ertem, Isabel H. Conze, Evelyne Brambilla, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, TBK Reddy, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Hajnalka Daligault, Karen Davenport, Tracy Erkkila, Lynne A. Goodwin, Wei Gu, Christine Munk, Hazuki Teshima, Yan Xu, Patrick Chain, Michael Woolbert, Nina Gunde-Cimerman, Yuri I. Wolf, Tine Grebenc, Cene Gostinčar, Michael J. Daly
Published 2017-07-01