Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery

Energy-dependent Lon proteases play a key role in cellular regulation by degrading short-lived regulatory proteins and misfolded proteins in the cell. The structure of the catalytically inactive S679A mutant of Escherichia coli LonA protease (EcLon) has been determined by cryo-EM at the resolution o...

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Main Authors: Istvan Botos, George T. Lountos, Weimin Wu, Scott Cherry, Rodolfo Ghirlando, Arsen M. Kudzhaev, Tatyana V. Rotanova, Natalia de Val, Joseph E. Tropea, Alla Gustchina, Alexander Wlodawer
Format: Article
Language:English
Published: Elsevier 2019-11-01
Series:Current Research in Structural Biology
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2665928X19300029
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spelling doaj-3a4bafe2973a426e8039983c811a2c882020-11-25T03:41:47ZengElsevierCurrent Research in Structural Biology2665-928X2019-11-0111320Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machineryIstvan Botos0George T. Lountos1Weimin Wu2Scott Cherry3Rodolfo Ghirlando4Arsen M. Kudzhaev5Tatyana V. Rotanova6Natalia de Val7Joseph E. Tropea8Alla Gustchina9Alexander Wlodawer10Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, MD 20892, USAMacromolecular Crystallography Laboratory, National Cancer Institute, Frederick, MD 21702, USA; Basic Science Program, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USACenter for Molecular Microscopy, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USAMacromolecular Crystallography Laboratory, National Cancer Institute, Frederick, MD 21702, USALaboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, MD 20892, USAShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, RussiaShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, RussiaCenter for Molecular Microscopy, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA; Electron Microscopy Laboratory, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USAMacromolecular Crystallography Laboratory, National Cancer Institute, Frederick, MD 21702, USAMacromolecular Crystallography Laboratory, National Cancer Institute, Frederick, MD 21702, USAMacromolecular Crystallography Laboratory, National Cancer Institute, Frederick, MD 21702, USA; Corresponding author.Energy-dependent Lon proteases play a key role in cellular regulation by degrading short-lived regulatory proteins and misfolded proteins in the cell. The structure of the catalytically inactive S679A mutant of Escherichia coli LonA protease (EcLon) has been determined by cryo-EM at the resolution of 3.5 Å. EcLonA without a bound substrate adopts a hexameric open-spiral quaternary structure that might represent the resting state of the enzyme. Upon interaction with substrate the open-spiral hexamer undergoes a major conformational change resulting in a compact, closed-circle hexamer as in the recent structure of a complex of Yersinia pestis LonA with a protein substrate. This major change is accomplished by the rigid-body rearrangement of the individual domains within the protomers of the complex around the hinge points in the interdomain linkers. Comparison of substrate-free and substrate-bound Lon structures allows to mark the location of putative pivotal points involved in such conformational changes.http://www.sciencedirect.com/science/article/pii/S2665928X19300029AAA+ proteinsATPase moduleLon proteaseCryo-EM
collection DOAJ
language English
format Article
sources DOAJ
author Istvan Botos
George T. Lountos
Weimin Wu
Scott Cherry
Rodolfo Ghirlando
Arsen M. Kudzhaev
Tatyana V. Rotanova
Natalia de Val
Joseph E. Tropea
Alla Gustchina
Alexander Wlodawer
spellingShingle Istvan Botos
George T. Lountos
Weimin Wu
Scott Cherry
Rodolfo Ghirlando
Arsen M. Kudzhaev
Tatyana V. Rotanova
Natalia de Val
Joseph E. Tropea
Alla Gustchina
Alexander Wlodawer
Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
Current Research in Structural Biology
AAA+ proteins
ATPase module
Lon protease
Cryo-EM
author_facet Istvan Botos
George T. Lountos
Weimin Wu
Scott Cherry
Rodolfo Ghirlando
Arsen M. Kudzhaev
Tatyana V. Rotanova
Natalia de Val
Joseph E. Tropea
Alla Gustchina
Alexander Wlodawer
author_sort Istvan Botos
title Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
title_short Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
title_full Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
title_fullStr Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
title_full_unstemmed Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
title_sort cryo-em structure of substrate-free e. coli lon protease provides insights into the dynamics of lon machinery
publisher Elsevier
series Current Research in Structural Biology
issn 2665-928X
publishDate 2019-11-01
description Energy-dependent Lon proteases play a key role in cellular regulation by degrading short-lived regulatory proteins and misfolded proteins in the cell. The structure of the catalytically inactive S679A mutant of Escherichia coli LonA protease (EcLon) has been determined by cryo-EM at the resolution of 3.5 Å. EcLonA without a bound substrate adopts a hexameric open-spiral quaternary structure that might represent the resting state of the enzyme. Upon interaction with substrate the open-spiral hexamer undergoes a major conformational change resulting in a compact, closed-circle hexamer as in the recent structure of a complex of Yersinia pestis LonA with a protein substrate. This major change is accomplished by the rigid-body rearrangement of the individual domains within the protomers of the complex around the hinge points in the interdomain linkers. Comparison of substrate-free and substrate-bound Lon structures allows to mark the location of putative pivotal points involved in such conformational changes.
topic AAA+ proteins
ATPase module
Lon protease
Cryo-EM
url http://www.sciencedirect.com/science/article/pii/S2665928X19300029
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