Exact transcript quantification over splice graphs
Abstract Background The probability of sequencing a set of RNA-seq reads can be directly modeled using the abundances of splice junctions in splice graphs instead of the abundances of a list of transcripts. We call this model graph quantification, which was first proposed by Bernard et al. (Bioinfor...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
BMC
2021-05-01
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| Series: | Algorithms for Molecular Biology |
| Subjects: | |
| Online Access: | https://doi.org/10.1186/s13015-021-00184-7 |