Zipper plot: visualizing transcriptional activity of genomic regions

Zipper plot: visualizing transcriptional activity of genomic regions

Abstract Background Reconstructing transcript models from RNA-sequencing (RNA-seq) data and establishing these as independent transcriptional units can be a challenging task. Current state-of-the-art tools for long non-coding RNA (lncRNA) annotation are mainly based on evolutionary constraints, whic...

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Bibliographic Details
Main Authors: Francisco Avila Cobos, Jasper Anckaert, Pieter-Jan Volders, Celine Everaert, Dries Rombaut, Jo Vandesompele, Katleen De Preter, Pieter Mestdagh
Format: Article
Language:English
Published: BMC 2017-05-01
Series:BMC Bioinformatics
Subjects:
Transcription Start Site
Genomic Feature
Transcript Model
lncRNA Transcript
Close Peak
Online Access:http://link.springer.com/article/10.1186/s12859-017-1651-7

Internet

http://link.springer.com/article/10.1186/s12859-017-1651-7

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