The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues

The post-acute phase of SARS-CoV-2 infection was investigated in rhesus (<i>Macaca mulatta</i>) and cynomolgus macaques (<i>Macaca fascicularis</i>). During the acute phase of infection, SARS-CoV-2 was shed via the nose and throat, and viral RNA was occasionally detected in f...

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Main Authors: Kinga P. Böszörményi, Marieke A. Stammes, Zahra C. Fagrouch, Gwendoline Kiemenyi-Kayere, Henk Niphuis, Daniella Mortier, Nikki van Driel, Ivonne Nieuwenhuis, Richard A. W. Vervenne, Tom Haaksma, Boudewijn Ouwerling, Deborah Adema, Roja Fidel Acar, Ella Zuiderwijk-Sick, Lisette Meijer, Petra Mooij, Ed J. Remarque, Herman Oostermeijer, Gerrit Koopman, Alexis C. R. Hoste, Patricia Sastre, Bart L. Haagmans, Ronald E. Bontrop, Jan A. M. Langermans, Willy M. Bogers, Ivanela Kondova, Ernst J. Verschoor, Babs E. Verstrepen
Format: Article
Language:English
Published: MDPI AG 2021-08-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/13/8/1673
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author Kinga P. Böszörményi
Marieke A. Stammes
Zahra C. Fagrouch
Gwendoline Kiemenyi-Kayere
Henk Niphuis
Daniella Mortier
Nikki van Driel
Ivonne Nieuwenhuis
Richard A. W. Vervenne
Tom Haaksma
Boudewijn Ouwerling
Deborah Adema
Roja Fidel Acar
Ella Zuiderwijk-Sick
Lisette Meijer
Petra Mooij
Ed J. Remarque
Herman Oostermeijer
Gerrit Koopman
Alexis C. R. Hoste
Patricia Sastre
Bart L. Haagmans
Ronald E. Bontrop
Jan A. M. Langermans
Willy M. Bogers
Ivanela Kondova
Ernst J. Verschoor
Babs E. Verstrepen
spellingShingle Kinga P. Böszörményi
Marieke A. Stammes
Zahra C. Fagrouch
Gwendoline Kiemenyi-Kayere
Henk Niphuis
Daniella Mortier
Nikki van Driel
Ivonne Nieuwenhuis
Richard A. W. Vervenne
Tom Haaksma
Boudewijn Ouwerling
Deborah Adema
Roja Fidel Acar
Ella Zuiderwijk-Sick
Lisette Meijer
Petra Mooij
Ed J. Remarque
Herman Oostermeijer
Gerrit Koopman
Alexis C. R. Hoste
Patricia Sastre
Bart L. Haagmans
Ronald E. Bontrop
Jan A. M. Langermans
Willy M. Bogers
Ivanela Kondova
Ernst J. Verschoor
Babs E. Verstrepen
The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues
Viruses
SARS-CoV-2
COVID-19
non-human primates
animal models
NHPs
author_facet Kinga P. Böszörményi
Marieke A. Stammes
Zahra C. Fagrouch
Gwendoline Kiemenyi-Kayere
Henk Niphuis
Daniella Mortier
Nikki van Driel
Ivonne Nieuwenhuis
Richard A. W. Vervenne
Tom Haaksma
Boudewijn Ouwerling
Deborah Adema
Roja Fidel Acar
Ella Zuiderwijk-Sick
Lisette Meijer
Petra Mooij
Ed J. Remarque
Herman Oostermeijer
Gerrit Koopman
Alexis C. R. Hoste
Patricia Sastre
Bart L. Haagmans
Ronald E. Bontrop
Jan A. M. Langermans
Willy M. Bogers
Ivanela Kondova
Ernst J. Verschoor
Babs E. Verstrepen
author_sort Kinga P. Böszörményi
title The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues
title_short The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues
title_full The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues
title_fullStr The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues
title_full_unstemmed The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary Tissues
title_sort post-acute phase of sars-cov-2 infection in two macaque species is associated with signs of ongoing virus replication and pathology in pulmonary and extrapulmonary tissues
publisher MDPI AG
series Viruses
issn 1999-4915
publishDate 2021-08-01
description The post-acute phase of SARS-CoV-2 infection was investigated in rhesus (<i>Macaca mulatta</i>) and cynomolgus macaques (<i>Macaca fascicularis</i>). During the acute phase of infection, SARS-CoV-2 was shed via the nose and throat, and viral RNA was occasionally detected in feces. This phase coincided with a transient change in systemic immune activation. Even after the alleged resolution of the infection, computed tomography (CT) and positron emission tomography (PET)-CT revealed pulmonary lesions and activated tracheobronchial lymph nodes in all animals. Post-mortem histological examination of the lung tissue revealed mostly marginal or resolving minimal lesions that were indicative of SARS-CoV-2 infection. Evidence for SARS-CoV-2-induced histopathology was also found in extrapulmonary tissue samples, such as conjunctiva, cervical, and mesenteric lymph nodes. However, 5–6 weeks after SARS-CoV-2 exposure, upon necropsy, viral RNA was still detectable in a wide range of tissue samples in 50% of the macaques and included amongst others the heart, the respiratory tract and surrounding lymph nodes, salivary gland, and conjunctiva. Subgenomic messenger RNA was detected in the lungs and tracheobronchial lymph nodes, indicative of ongoing virus replication during the post-acute phase. These results could be relevant for understanding the long-term consequences of COVID-19 in humans.
topic SARS-CoV-2
COVID-19
non-human primates
animal models
NHPs
url https://www.mdpi.com/1999-4915/13/8/1673
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spelling doaj-f07ae1b8ce4d430cb2e94285344849662021-08-26T14:27:18ZengMDPI AGViruses1999-49152021-08-01131673167310.3390/v13081673The Post-Acute Phase of SARS-CoV-2 Infection in Two Macaque Species Is Associated with Signs of Ongoing Virus Replication and Pathology in Pulmonary and Extrapulmonary TissuesKinga P. Böszörményi0Marieke A. Stammes1Zahra C. Fagrouch2Gwendoline Kiemenyi-Kayere3Henk Niphuis4Daniella Mortier5Nikki van Driel6Ivonne Nieuwenhuis7Richard A. W. Vervenne8Tom Haaksma9Boudewijn Ouwerling10Deborah Adema11Roja Fidel Acar12Ella Zuiderwijk-Sick13Lisette Meijer14Petra Mooij15Ed J. Remarque16Herman Oostermeijer17Gerrit Koopman18Alexis C. R. Hoste19Patricia Sastre20Bart L. Haagmans21Ronald E. Bontrop22Jan A. M. Langermans23Willy M. Bogers24Ivanela Kondova25Ernst J. Verschoor26Babs E. Verstrepen27Biomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsDepartment of Parasitology, BPRC, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsAnimal Science Department, BPRC, 2288 GJ Rijswijk, The NetherlandsDepartment of Parasitology, BPRC, 2288 GJ Rijswijk, The NetherlandsDepartment of Parasitology, BPRC, 2288 GJ Rijswijk, The NetherlandsAnimal Science Department, BPRC, 2288 GJ Rijswijk, The NetherlandsAnimal Science Department, BPRC, 2288 GJ Rijswijk, The NetherlandsAnimal Science Department, BPRC, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsAlternatives Unit, BPRC, 2288 GJ Rijswijk, The NetherlandsDepartment of Parasitology, BPRC, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsEurofins-Inmunología y Genética Aplicada (Eurofins-INGENASA), 28037 Madrid, SpainEurofins-Inmunología y Genética Aplicada (Eurofins-INGENASA), 28037 Madrid, SpainDepartment of Viroscience, Erasmus University Medical Center, 3015 GD Rotterdam, The NetherlandsDepartment of Comparative Genetics and Refinement, BPRC, 2288 GJ Rijswijk, The NetherlandsAnimal Science Department, BPRC, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsAnimal Science Department, BPRC, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsBiomedical Primate Research Centre (BPRC), Department of Virology, 2288 GJ Rijswijk, The NetherlandsThe post-acute phase of SARS-CoV-2 infection was investigated in rhesus (<i>Macaca mulatta</i>) and cynomolgus macaques (<i>Macaca fascicularis</i>). During the acute phase of infection, SARS-CoV-2 was shed via the nose and throat, and viral RNA was occasionally detected in feces. This phase coincided with a transient change in systemic immune activation. Even after the alleged resolution of the infection, computed tomography (CT) and positron emission tomography (PET)-CT revealed pulmonary lesions and activated tracheobronchial lymph nodes in all animals. Post-mortem histological examination of the lung tissue revealed mostly marginal or resolving minimal lesions that were indicative of SARS-CoV-2 infection. Evidence for SARS-CoV-2-induced histopathology was also found in extrapulmonary tissue samples, such as conjunctiva, cervical, and mesenteric lymph nodes. However, 5–6 weeks after SARS-CoV-2 exposure, upon necropsy, viral RNA was still detectable in a wide range of tissue samples in 50% of the macaques and included amongst others the heart, the respiratory tract and surrounding lymph nodes, salivary gland, and conjunctiva. Subgenomic messenger RNA was detected in the lungs and tracheobronchial lymph nodes, indicative of ongoing virus replication during the post-acute phase. These results could be relevant for understanding the long-term consequences of COVID-19 in humans.https://www.mdpi.com/1999-4915/13/8/1673SARS-CoV-2COVID-19non-human primatesanimal modelsNHPs