Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe

by Thiseas C. Lamnidis, Kerttu Majander, Choongwon Jeong, Elina Salmela, Anna Wessman, Vyacheslav Moiseyev, Valery Khartanovich, Oleg Balanovsky, Matthias Ongyerth, Antje Weihmann, Antti Sajantila, Janet Kelso, Svante Pääbo, Päivi Onkamo, Wolfgang Haak, Johannes Krause, Stephan Schiffels
Published 2018-11-01

Author Correction: The genetic prehistory of the Baltic Sea region

by Alissa Mittnik, Chuan-Chao Wang, Saskia Pfrengle, Mantas Daubaras, Gunita Zariņa, Fredrik Hallgren, Raili Allmäe, Valery Khartanovich, Vyacheslav Moiseyev, Mari Tõrv, Anja Furtwängler, Aida Andrades Valtueña, Michal Feldman, Christos Economou, Markku Oinonen, Andrejs Vasks, Elena Balanovska, David Reich, Rimantas Jankauskas, Wolfgang Haak, Stephan Schiffels, Johannes Krause
Published 2018-04-01

Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager

by James A. Fellows Yates, Thiseas C. Lamnidis, Maxime Borry, Aida Andrades Valtueña, Zandra Fagernäs, Stephen Clayton, Maxime U. Garcia, Judith Neukamm, Alexander Peltzer
Published 2021-03-01

The genetic prehistory of the Baltic Sea region

by Alissa Mittnik, Chuan-Chao Wang, Saskia Pfrengle, Mantas Daubaras, Gunita Zariņa, Fredrik Hallgren, Raili Allmäe, Valery Khartanovich, Vyacheslav Moiseyev, Mari Tõrv, Anja Furtwängler, Aida Andrades Valtueña, Michal Feldman, Christos Economou, Markku Oinonen, Andrejs Vasks, Elena Balanovska, David Reich, Rimantas Jankauskas, Wolfgang Haak, Stephan Schiffels, Johannes Krause
Published 2018-01-01

Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir

by James A. Fellows Yates, Aida Andrades Valtueña, Åshild J. Vågene, Becky Cribdon, Irina M. Velsko, Maxime Borry, Miriam J. Bravo-Lopez, Antonio Fernandez-Guerra, Eleanor J. Green, Shreya L. Ramachandran, Peter D. Heintzman, Maria A. Spyrou, Alexander Hübner, Abigail S. Gancz, Jessica Hider, Aurora F. Allshouse, Valentina Zaro, Christina Warinner
Published 2021-01-01

CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content

by Maxime Borry, Bryan Cordova, Angela Perri, Marsha Wibowo, Tanvi Prasad Honap, Jada Ko, Jie Yu, Kate Britton, Linus Girdland-Flink, Robert C. Power, Ingelise Stuijts, Domingo C. Salazar-García, Courtney Hofman, Richard Hagan, Thérèse Samdapawindé Kagoné, Nicolas Meda, Helene Carabin, David Jacobson, Karl Reinhard, Cecil Lewis, Aleksandar Kostic, Choongwon Jeong, Alexander Herbig, Alexander Hübner, Christina Warinner
Published 2020-04-01

Ancient human genome-wide data from a 3000-year interval in the Caucasus corresponds with eco-geographic regions

by Chuan-Chao Wang, Sabine Reinhold, Alexey Kalmykov, Antje Wissgott, Guido Brandt, Choongwon Jeong, Olivia Cheronet, Matthew Ferry, Eadaoin Harney, Denise Keating, Swapan Mallick, Nadin Rohland, Kristin Stewardson, Anatoly R. Kantorovich, Vladimir E. Maslov, Vladimira G. Petrenko, Vladimir R. Erlikh, Biaslan Ch. Atabiev, Rabadan G. Magomedov, Philipp L. Kohl, Kurt W. Alt, Sandra L. Pichler, Claudia Gerling, Harald Meller, Benik Vardanyan, Larisa Yeganyan, Alexey D. Rezepkin, Dirk Mariaschk, Natalia Berezina, Julia Gresky, Katharina Fuchs, Corina Knipper, Stephan Schiffels, Elena Balanovska, Oleg Balanovsky, Iain Mathieson, Thomas Higham, Yakov B. Berezin, Alexandra Buzhilova, Viktor Trifonov, Ron Pinhasi, Andrej B. Belinskij, David Reich, Svend Hansen, Johannes Krause, Wolfgang Haak
Published 2019-02-01

 Maternal Lineages from 10–11th Century Commoner Cemeteries of the Carpathian Basin

by Kitti Maár, Gergely I. B. Varga, Bence Kovács, Oszkár Schütz, Zoltán Maróti, Tibor Kalmár, Emil Nyerki, István Nagy, Dóra Latinovics, Balázs Tihanyi, Antónia Marcsik, György Pálfi, Zsolt Bernert, Zsolt Gallina, Sándor Varga, László Költő, István Raskó, Tibor Török, Endre Neparáczki
Published 2021-03-01

Ancient Egyptian mummy genomes suggest an increase of Sub-Saharan African ancestry in post-Roman periods

by Verena J. Schuenemann, Alexander Peltzer, Beatrix Welte, W. Paul van Pelt, Martyna Molak, Chuan-Chao Wang, Anja Furtwängler, Christian Urban, Ella Reiter, Kay Nieselt, Barbara Teßmann, Michael Francken, Katerina Harvati, Wolfgang Haak, Stephan Schiffels, Johannes Krause
Published 2017-05-01

PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly

by Maxime Borry, Alexander Hübner, Adam B. Rohrlach, Christina Warinner
Published 2021-07-01

A seventeenth-century Mycobacterium tuberculosis genome supports a Neolithic emergence of the Mycobacterium tuberculosis complex

by Susanna Sabin, Alexander Herbig, Åshild J. Vågene, Torbjörn Ahlström, Gracijela Bozovic, Caroline Arcini, Denise Kühnert, Kirsten I. Bos
Published 2020-08-01

Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage

by Irina M. Velsko, James A. Fellows Yates, Franziska Aron, Richard W. Hagan, Laurent A. F. Frantz, Louise Loe, Juan Bautista Rodriguez Martinez, Eros Chaves, Chris Gosden, Greger Larson, Christina Warinner
Published 2019-07-01

Genome-wide autosomal, mtDNA, and Y chromosome analysis of King Bela III of the Hungarian Arpad dynasty

by Chuan-Chao Wang, Cosimo Posth, Anja Furtwängler, Katalin Sümegi, Zsolt Bánfai, Miklós Kásler, Johannes Krause, Béla Melegh
Published 2021-09-01

Ancient proteins provide evidence of dairy consumption in eastern Africa

by Madeleine Bleasdale, Kristine K. Richter, Anneke Janzen, Samantha Brown, Ashley Scott, Jana Zech, Shevan Wilkin, Ke Wang, Stephan Schiffels, Jocelyne Desideri, Marie Besse, Jacques Reinold, Mohamed Saad, Hiba Babiker, Robert C. Power, Emmanuel Ndiema, Christine Ogola, Fredrick K. Manthi, Muhammad Zahir, Michael Petraglia, Christian Trachsel, Paolo Nanni, Jonas Grossmann, Jessica Hendy, Alison Crowther, Patrick Roberts, Steven T. Goldstein, Nicole Boivin
Published 2021-01-01

Reconstructing genetic histories and social organisation in Neolithic and Bronze Age Croatia

by Suzanne Freilich, Harald Ringbauer, Dženi Los, Mario Novak, Dinko Tresić Pavičić, Stephan Schiffels, Ron Pinhasi
Published 2021-08-01

Parental relatedness through time revealed by runs of homozygosity in ancient DNA

by Harald Ringbauer, John Novembre, Matthias Steinrücken
Published 2021-09-01

Population history and genetic adaptation of the Fulani nomads: inferences from genome-wide data and the lactase persistence trait

by Mário Vicente, Edita Priehodová, Issa Diallo, Eliška Podgorná, Estella S. Poloni, Viktor Černý, Carina M. Schlebusch
Published 2019-12-01

Clash of cultures? Archaeology and genetics

by Mark Pluciennik
Published 2006-12-01

Who did it? Perspectives on the beginning of the Neolithic in Greece

by Dimitrios Vlachos
Published 2003-01-01

Genomic approaches for studying crop evolution

by Mona Schreiber, Nils Stein, Martin Mascher
Published 2018-09-01