Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics

by Simon Roux, Alyse K Hawley, Monica Torres Beltran, Melanie Scofield, Patrick Schwientek, Ramunas Stepanauskas, Tanja Woyke, Steven J Hallam, Matthew B Sullivan
Published 2014-08-01

Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes

by Marina García-López, Jan P. Meier-Kolthoff, Brian J. Tindall, Sabine Gronow, Tanja Woyke, Nikos C. Kyrpides, Richard L. Hahnke, Markus Göker
Published 2019-09-01

Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes

by Gina López, Carolina Diaz-Cárdenas, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, J. David Alzate, Laura N. González, Silvia Restrepo, Sandra Baena
Published 2017-12-01

Comparative genomics suggests an independent origin of cytoplasmic incompatibility in Cardinium hertigii.

by Thomas Penz, Stephan Schmitz-Esser, Suzanne E Kelly, Bodil N Cass, Anneliese Müller, Tanja Woyke, Stephanie A Malfatti, Martha S Hunter, Matthias Horn
Published 2012-01-01

Genomics of Methylotrophy in Gram-Positive Methylamine-Utilizing Bacteria

by Tami L. McTaggart, David A. C. Beck, Usanisa Setboonsarng, Nicole Shapiro, Tanja Woyke, Mary E. Lidstrom, Marina G. Kalyuzhnaya, Ludmila Chistoserdova
Published 2015-03-01

Multiple single-cell genomes provide insight into functions of uncultured Deltaproteobacteria in the human oral cavity.

by Alisha G Campbell, James H Campbell, Patrick Schwientek, Tanja Woyke, Alexander Sczyrba, Steve Allman, Clifford J Beall, Ann Griffen, Eugene Leys, Mircea Podar
Published 2013-01-01

Functional Signatures of the Epiphytic Prokaryotic Microbiome of Agaves and Cacti

by Víctor M. Flores-Núñez, Citlali Fonseca-García, Citlali Fonseca-García, Damaris Desgarennes, Damaris Desgarennes, Emiley Eloe-Fadrosh, Tanja Woyke, Laila P. Partida-Martínez
Published 2020-01-01

Gene Expression Profile of Glioblastoma Multiforme Invasive Phenotype Points to New Therapeutic Targets

by Dominique B. Hoelzinger, Luigi Mariani, Joachim Weis, Tanja Woyke, Theresa J. Berens, WendyS. McDonough, Andrew Sloan, Stephen W. Coons, Michael E. Berens
Published 2005-01-01

Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring

by Carolina Díaz-Cárdenas, Gina López, José David Alzate-Ocampo, Laura N. González, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Silvia Restrepo, Sandra Baena
Published 2017-12-01

Comparative genomics of freshwater Fe-oxidizing bacteria: Implications for physiology, ecology, and systematics

by David eEmerson, Erin eField, Olga eChertkov, Karen eDavenport, Lynne eGoodwin, Christine eMunk, Matt eNolan, Tanja eWoyke
Published 2013-09-01

Genome-Based Taxonomic Classification of the Phylum Actinobacteria

by Imen Nouioui, Lorena Carro, Marina García-López, Jan P. Meier-Kolthoff, Tanja Woyke, Nikos C. Kyrpides, Rüdiger Pukall, Hans-Peter Klenk, Michael Goodfellow, Markus Göker
Published 2018-08-01

The expanded diversity of methylophilaceae from Lake Washington through cultivation and genomic sequencing of novel ecotypes.

by David A C Beck, Tami L McTaggart, Usanisa Setboonsarng, Alexey Vorobev, Marina G Kalyuzhnaya, Natalia Ivanova, Lynne Goodwin, Tanja Woyke, Mary E Lidstrom, Ludmila Chistoserdova
Published 2014-01-01

Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile

by Emily Denise Melton, Dimitry Y. Sorokin, Lex Overmars, Alla L. Lapidus, Manoj Pillay, Natalia Ivanova, Tijana Glavina del Rio, Nikos C. Kyrpides, Tanja Woyke, Gerard Muyzer
Published 2017-09-01

Lytic archaeal viruses infect abundant primary producers in Earth’s crust

by Janina Rahlff, Victoria Turzynski, Sarah P. Esser, Indra Monsees, Till L. V. Bornemann, Perla Abigail Figueroa-Gonzalez, Frederik Schulz, Tanja Woyke, Andreas Klingl, Cristina Moraru, Alexander J. Probst
Published 2021-07-01

Comparative genomic insights into ecophysiology of neutrophilic, microaerophilic iron oxidizing bacteria

by Shingo eKato, Shingo eKato, Moriya eOhkuma, Deborah H. Powell, Sean T. Krepski, Kenshiro eOshima, Masahira eHattori, Nicole eShapiro, Tanja eWoyke, Clara S Chan
Published 2015-11-01

Yellowstone Lake Nanoarchaeota

by Scott eClingenpeel, Jinjun eKan, Rich eMacur, Tanja eWoyke, Dave eLovalvo, John eVarley, William P. Inskeep, Kenneth eNealson, Tim eMcDermott
Published 2013-09-01

The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation.

by Konstantinos Mavromatis, Miriam L Land, Thomas S Brettin, Daniel J Quest, Alex Copeland, Alicia Clum, Lynne Goodwin, Tanja Woyke, Alla Lapidus, Hans Peter Klenk, Robert W Cottingham, Nikos C Kyrpides
Published 2012-01-01

Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria

by Anton Hördt, Marina García López, Jan P. Meier-Kolthoff, Marcel Schleuning, Lisa-Maria Weinhold, Lisa-Maria Weinhold, Brian J. Tindall, Sabine Gronow, Nikos C. Kyrpides, Tanja Woyke, Markus Göker
Published 2020-04-01

Genome-Based Taxonomic Classification of Bacteroidetes

by Richard L. Hahnke, Jan P. Meier-Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia N. Ivanova, Tanja Woyke, Nikos C. Kyrpides, Nikos C. Kyrpides, Hans-Peter Klenk, Markus Göker
Published 2016-12-01

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes

by Richard L. Hahnke, Jan P. Meier-Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia N. Ivanova, Tanja Woyke, Nikos C. Kyrpides, Nikos C. Kyrpides, Hans-Peter Klenk, Markus Göker
Published 2018-02-01