Molecular Simulations Reveal the Role of Antibody Fine Specificity and Viral Maturation State on Antibody-Dependent Enhancement of Infection in Dengue Virus

by Daniel R. Ripoll, Daniel R. Ripoll, Anders Wallqvist, Sidhartha Chaudhury
Published 2019-06-01

Using the antibody-antigen binding interface to train image-based deep neural networks for antibody-epitope classification.

by Daniel R Ripoll, Sidhartha Chaudhury, Anders Wallqvist
Published 2021-03-01

Dengue virus antibody database: Systematically linking serotype-specificity with epitope mapping in dengue virus.

by Sidhartha Chaudhury, Gregory D Gromowski, Daniel R Ripoll, Ilja V Khavrutskii, Valmik Desai, Anders Wallqvist
Published 2017-02-01

Quantitative predictions of binding free energy changes in drug-resistant influenza neuraminidase.

by Daniel R Ripoll, Ilja V Khavrutskii, Sidhartha Chaudhury, Jin Liu, Robert A Kuschner, Anders Wallqvist, Jaques Reifman
Published 2012-01-01

Tracing the origin of the fungal α1 domain places its ancestor in the HMG-box superfamily: implication for fungal mating-type evolution.

by Tom Martin, Shun-Wen Lu, Herman van Tilbeurgh, Daniel R Ripoll, Christina Dixelius, B Gillian Turgeon, Robert Debuchy
Published 2010-12-01

A fusion-inhibiting peptide against Rift Valley fever virus inhibits multiple, diverse viruses.

by Jeffrey W Koehler, Jeffrey M Smith, Daniel R Ripoll, Kristin W Spik, Shannon L Taylor, Catherine V Badger, Rebecca J Grant, Monica M Ogg, Anders Wallqvist, Mary C Guttieri, Robert F Garry, Connie S Schmaljohn
Published 2013-01-01