A stochastic hybrid model of a biological filter

by Andrea Ocone, Guido Sanguinetti
Published 2013-08-01

BRIE: transcriptome-wide splicing quantification in single cells

by Yuanhua Huang, Guido Sanguinetti
Published 2017-06-01

BRIE2: computational identification of splicing phenotypes from single-cell transcriptomic experiments

by Yuanhua Huang, Guido Sanguinetti
Published 2021-08-01

Melissa: Bayesian clustering and imputation of single-cell methylomes

by Chantriolnt-Andreas Kapourani, Guido Sanguinetti
Published 2019-03-01

Cox process representation and inference for stochastic reaction–diffusion processes

by David Schnoerr, Ramon Grima, Guido Sanguinetti
Published 2016-05-01

On the Robustness of Temporal Properties for Stochastic Models

by Ezio Bartocci, Luca Bortolussi, Laura Nenzi, Guido Sanguinetti
Published 2013-08-01

The MOBSTER R package for tumour subclonal deconvolution from bulk DNA whole-genome sequencing data

by Giulio Caravagna, Guido Sanguinetti, Trevor A. Graham, Andrea Sottoriva
Published 2020-11-01

Neural field models for latent state inference: Application to large-scale neuronal recordings.

by Michael E Rule, David Schnoerr, Matthias H Hennig, Guido Sanguinetti
Published 2019-11-01

A subsystems approach for parameter estimation of ODE models of hybrid systems

by Guido Sanguinetti, Stephen Gilmore, Andrea Ocone, Allan Clark, Anastasis Georgoulas
Published 2012-08-01

scMET: Bayesian modeling of DNA methylation heterogeneity at single-cell resolution

by Chantriolnt-Andreas Kapourani, Ricard Argelaguet, Guido Sanguinetti, Catalina A. Vallejos
Published 2021-04-01

diffBUM-HMM: a robust statistical modeling approach for detecting RNA flexibility changes in high-throughput structure probing data

by Paolo Marangio, Ka Ying Toby Law, Guido Sanguinetti, Sander Granneman
Published 2021-05-01

Quantitative analysis questions the role of MeCP2 as a global regulator of alternative splicing.

by Kashyap Chhatbar, Justyna Cholewa-Waclaw, Ruth Shah, Adrian Bird, Guido Sanguinetti
Published 2020-10-01

Analysis of transcript changes in a heme-deficient mutant of Escherichia coli in response to CORM-3 [Ru(CO)3Cl(glycinate)]

by Jayne Louise Wilson, Samantha McLean, Ronald Begg, Guido Sanguinetti, Robert K. Poole
Published 2015-09-01

Systems analysis of transcription factor activities in environments with stable and dynamic oxygen concentrations

by Matthew D. Rolfe, Andrea Ocone, Melanie R. Stapleton, Simon Hall, Eleanor W. Trotter, Robert K. Poole, Guido Sanguinetti, Jeffrey Green
Published 2012-01-01

Kinetic CRAC uncovers a role for Nab3 in determining gene expression profiles during stress

by Rob van Nues, Gabriele Schweikert, Erica de Leau, Alina Selega, Andrew Langford, Ryan Franklin, Ira Iosub, Peter Wadsworth, Guido Sanguinetti, Sander Granneman
Published 2017-04-01

Reprogramming of Escherichia coli K-12 metabolism during the initial phase of transition from an anaerobic to a micro-aerobic environment.

by Eleanor W Trotter, Matthew D Rolfe, Andrea M Hounslow, C Jeremy Craven, Michael P Williamson, Guido Sanguinetti, Robert K Poole, Jeffrey Green
Published 2011-01-01

MeCP2 recognizes cytosine methylated tri-nucleotide and di-nucleotide sequences to tune transcription in the mammalian brain.

by Sabine Lagger, John C Connelly, Gabriele Schweikert, Shaun Webb, Jim Selfridge, Bernard H Ramsahoye, Miao Yu, Chuan He, Guido Sanguinetti, Lawrence C Sowers, Malcolm D Walkinshaw, Adrian Bird
Published 2017-05-01

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

by Stephen J. Clark, Ricard Argelaguet, Chantriolnt-Andreas Kapourani, Thomas M. Stubbs, Heather J. Lee, Celia Alda-Catalinas, Felix Krueger, Guido Sanguinetti, Gavin Kelsey, John C. Marioni, Oliver Stegle, Wolf Reik
Published 2018-02-01