Effects of the COVID-19 pandemic on life scientists

by Jan O. Korbel, Oliver Stegle
Published 2020-05-01

Joint modelling of confounding factors and prominent genetic regulators provides increased accuracy in genetical genomics studies.

by Nicoló Fusi, Oliver Stegle, Neil D Lawrence
Published 2012-01-01

IceR improves proteome coverage and data completeness in global and single-cell proteomics

by Mathias Kalxdorf, Torsten Müller, Oliver Stegle, Jeroen Krijgsveld
Published 2021-08-01

Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype reference

by Yuanhua Huang, Davis J. McCarthy, Oliver Stegle
Published 2019-12-01

A Bayesian framework to account for complex non-genetic factors in gene expression levels greatly increases power in eQTL studies.

by Oliver Stegle, Leopold Parts, Richard Durbin, John Winn
Published 2010-05-01

Joint genetic analysis of gene expression data with inferred cellular phenotypes.

by Leopold Parts, Oliver Stegle, John Winn, Richard Durbin
Published 2011-01-01

DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

by Christof Angermueller, Heather J. Lee, Wolf Reik, Oliver Stegle
Published 2017-04-01

Joint genetic analysis using variant sets reveals polygenic gene-context interactions.

by Francesco Paolo Casale, Danilo Horta, Barbara Rakitsch, Oliver Stegle
Published 2017-04-01

Erratum to: DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

by Christof Angermueller, Heather J. Lee, Wolf Reik, Oliver Stegle
Published 2017-05-01

Using the past to estimate sensory uncertainty

by Ulrik Beierholm, Tim Rohe, Ambra Ferrari, Oliver Stegle, Uta Noppeney
Published 2020-12-01

A Toolbox for Predicting G-Quadruplex Formation and Stability

by Han Min Wong, Oliver Stegle, Simon Rodgers, Julian Leon Huppert
Published 2010-01-01

Modeling Cell-Cell Interactions from Spatial Molecular Data with Spatial Variance Component Analysis

by Damien Arnol, Denis Schapiro, Bernd Bodenmiller, Julio Saez-Rodriguez, Oliver Stegle
Published 2019-10-01

f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq

by Florian Buettner, Naruemon Pratanwanich, Davis J. McCarthy, John C. Marioni, Oliver Stegle
Published 2017-11-01

MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data

by Ricard Argelaguet, Damien Arnol, Danila Bredikhin, Yonatan Deloro, Britta Velten, John C. Marioni, Oliver Stegle
Published 2020-05-01

Limited Contribution of DNA Methylation Variation to Expression Regulation in Arabidopsis thaliana.

by Dazhe Meng, Manu Dubin, Pei Zhang, Edward J Osborne, Oliver Stegle, Richard M Clark, Magnus Nordborg
Published 2016-07-01

Estimation of Free-Living Energy Expenditure by Heart Rate and Movement Sensing: A Doubly-Labelled Water Study.

by Søren Brage, Kate Westgate, Paul W Franks, Oliver Stegle, Antony Wright, Ulf Ekelund, Nicholas J Wareham
Published 2015-01-01

Dissecting indirect genetic effects from peers in laboratory mice

by Amelie Baud, Francesco Paolo Casale, Amanda M. Barkley-Levenson, Nilgoun Farhadi, Charlotte Montillot, Binnaz Yalcin, Jerome Nicod, Abraham A. Palmer, Oliver Stegle
Published 2021-07-01

Multi-tissue DNA methylation age predictor in mouse

by Thomas M. Stubbs, Marc Jan Bonder, Anne-Katrien Stark, Felix Krueger, BI Ageing Clock Team, Ferdinand von Meyenn, Oliver Stegle, Wolf Reik
Published 2017-04-01

Genotype-environment interactions reveal causal pathways that mediate genetic effects on phenotype.

by Julien Gagneur, Oliver Stegle, Chenchen Zhu, Petra Jakob, Manu M Tekkedil, Raeka S Aiyar, Ann-Kathrin Schuon, Dana Pe'er, Lars M Steinmetz
Published 2013-01-01

Population-scale proteome variation in human induced pluripotent stem cells

by Bogdan Andrei Mirauta, Daniel D Seaton, Dalila Bensaddek, Alejandro Brenes, Marc Jan Bonder, Helena Kilpinen, HipSci Consortium, Oliver Stegle, Angus I Lamond
Published 2020-08-01