Author Search Results

1

Thawing Frozen Robust Multi-array Analysis (fRMA)

by Irizarry Rafael A, McCall Matthew N
Published 2011-09-01

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2

Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips

by Carvalho Benilton S, Liu Ruijie, Ritchie Matthew E, Irizarry Rafael A
Published 2011-03-01

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3

The partitioned LASSO-patternsearch algorithm with application to gene expression data

by Shi Weiliang, Wahba Grace, Irizarry Rafael A, Bravo Hector, Wright Stephen J
Published 2012-05-01

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4

A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database

by Tripputi Mark, Lin Xue, Irizarry Rafael A, Katz Simon, Porter Mark W
Published 2006-10-01

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5

Processing of Agilent microRNA array data

by Callejas Sergio, González Manuel A, López-Romero Pedro, Dopazo Ana, Irizarry Rafael A
Published 2010-01-01

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6

Gene expression anti-profiles as a basis for accurate universal cancer signatures

by Corrada Bravo Héctor, Pihur Vasyl, McCall Matthew, Irizarry Rafael A, Leek Jeffrey T
Published 2012-10-01

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7

Improved base-calling and quality scores for 454 sequencing based on a Hurdle Poisson model

by Beuf Kristof, Schrijver Joachim, Thas Olivier, Criekinge Wim, Irizarry Rafael A, Clement Lieven
Published 2012-11-01

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8

Performance evaluation of commercial miRNA expression array platforms

by Wilson Michael, Eveleigh Deepa, McCall Matthew N, Sah Sachin, Irizarry Rafael A
Published 2010-03-01

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9

Assessing affymetrix GeneChip microarray quality

by Lukk Margus, Murakami Peter N, McCall Matthew N, Huber Wolfgang, Irizarry Rafael A
Published 2011-05-01

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10

Meta-analysis of gut microbiome studies identifies disease-specific and shared responses

by Irizarry, Rafael A., Duvallet, Claire, Gibbons, Sean Michael, Gurry, Thomas Jerome, Alm, Eric J
Published 2018

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11

<it>In vitro </it>identification and <it>in silico </it>utilization of interspecies sequence similarities using GeneChip<sup>® </sup>technology

by Ye Shui Q, Irizarry Rafael A, Simon Brett A, Ma Shwu-Fan, Grigoryev Dmitry N, Garcia Joe GN
Published 2005-05-01

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12

Global mRNA expression analysis in myosin II deficient strains of <it>Saccharomyces cerevisiae </it>reveals an impairment of cell integrity functions

by Rivera-Molina Félix E, Díaz-Blanco Nitza L, Irizarry Rafael A, Rodríguez-Quiñones José F, Gómez-Garzón Diana, Rodríguez-Medina José R
Published 2008-01-01

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13

MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens

by Li, Wei, Xu, Han, Xiao, Tengfei, Cong, Le, Love, Michael I., Zhang, Feng, Irizarry, Rafael A., Liu, Jun S., Brown, Myles, Liu, X. Shirley
Published 2015

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14

A gene expression atlas of embryonic neurogenesis in Drosophila reveals complex spatiotemporal regulation of lncRNAs

by McCorkindale, Alexandra L., Wahle, Philipp, Werner, Sascha, Jungreis, Irwin, Menzel, Peter, Shukla, Chinmay J., Abreu, Rúben Lopes Pereira, Irizarry, Rafael A., Meyer, Irmtraud M., Kellis, Manolis, Zinzen, Robert P.
Published 2020

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15

Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences

by De Marzo Angelo M, Zheng Qizhi, Carvalho Benilton, Morgan James D, He Tony L, Badrinath Raghav, Aryee Martin J, Esopi David, Haffner Michael C, Wu Zhijin, Yegnasubramanian Srinivasan, Irizarry Rafael A, Nelson William G
Published 2011-06-01

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16

A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

by White Joseph, Stoeckert Christian J, Sherlock Gavin, Quackenbush John, Petersen Kjell, Miller Michael, Maier Donald S, Liu Junmin, Irizarry Rafael A, Holloway Ele, Farne Anna, Causton Helen C, Spellman Paul T, Rocca-Serra Philippe, Rayner Tim F, Whetzel Patricia L, Wymore Farrell, Parkinson Helen, Sarkans Ugis, Ball Catherine A, Brazma Alvis
Published 2006-11-01

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17

Epigenetic memory in induced pluripotent stem cells

by Kim, K., Doi, A., Wen, B., Ng, K., Zhao, R., Cahan, Patrick, Kim, J., Aryee, M. J., Ji, H., Ehrlich, L. I. R., Yabuuchi, A., Takeuchi, A., Cunniff, K. C., Hongguang, H., Mckinney-Freeman, S., Naveiras, O., Yoon, T. J., Irizarry, Rafael A., Jung, N., Seita, J., Hanna, Jacob, Murakami, P., Jaenisch, Rudolf, Weissleder, R., Orkin, Stuart H.
Published 2012

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