Diverse cell stresses induce unique patterns of tRNA up- and down-regulation: tRNA-seq for quantifying changes in tRNA copy number

by Pang, Yan Ling Joy, Abo, Ryan, Levine, Stuart S., Dedon, Peter C
Published 2014

Effects of Age on Meiosis in Budding Yeast

by Boselli, Monica, Rock, Jeremy Michael, Unal, Elcin, Levine, Stuart S., Amon, Angelika B
Published 2012

Polycomb Repressive Complex 2 Regulates Lineage Fidelity during Embryonic Stem Cell Differentiation

by Levine, Stuart S., Thornton, Seraphim R., Butty, Vincent L G, Boyer, Laurie Ann
Published 2014

Global transcriptional regulation of innate immunity by ATF-7 in C. elegans

by Fletcher, Marissa, Tillman, Erik J., Butty, Vincent L., Levine, Stuart S., Kim, Dennis H.
Published 2020

Admixture and recombination among Toxoplasma gondii lineages explain global genome diversity

by Minot, Samuel, Melo, Mariane Bandeira, Li, Fugen, Lu, Diana, Neidelman, Wendy, Levine, Stuart S., Saeij, Jeroen
Published 2013

Transportable, Chemical Genetic Methodology for the Small Molecule-Mediated Inhibition of Heat Shock Factor 1

by Moore, Christopher Lawrence, Dewal, Mahender, Nekongo, Emmanuel E, Santiago, Sebasthian, Lu, Nancy B., Levine, Stuart S., Shoulders, Matthew D.
Published 2017

Ronin/Hcf-1 binds to a hyperconserved enhancer element and regulates genes involved in the growth of embryonic stem cells

by Dejosez, M., Frampton, Garrett M., Whyte, W. A., Stratton, S. A., Barton, Michelle C., Gunaratne, P. H., Zwaka, T. P., Levine, Stuart S., Young, Richard A.
Published 2014

Arsenic Exposure Perturbs the Gut Microbiome and Its Metabolic Profile in Mice: An Integrated Metagenomics and Metabolomics Analysis

by Lu, Kun, Schlieper, Katherine Ann, Graffam, Michelle E., Wishnok, John S., Swenberg, James A., Levine, Stuart S., Abo, Ryan, Fox, James G, Tannenbaum, Steven R
Published 2015

Encapsulated miR-200c and Nkx2.1 in a nuclear/mitochondria transcriptional regulatory network of non-metastatic and metastatic lung cancer cells

by D'Almeida, Olga, Mothar, Omar, Bondzie, Esther A, Lieumo, Yolande, Tagne, Laure, Gupta, Sumeet, Volkert, Thomas, Tagne, Jean-Bosco, Bondzie, Esther Apraku, Levine, Stuart S.
Published 2019

miR-132, an experience-dependent microRNA, is essential for visual cortex plasticity

by Mellios, Nikolaos, Sugihara, Hiroki, Castro, Jorge, Banerjee, Abhishek, Le, Chuong N., Kumar, Arooshi R., Crawford, Benjamin, Strathmann, Julia, Tropea, Daniela, Edbauer, Dieter, Sur, Mriganka, Levine, Stuart S.
Published 2015

Mutational spectra of aflatoxin B

by Fox, Edward J., Loeb, Lawrence A., Chawanthayatham, Supawadee, Valentine III, Charles Clinton, Fedeles, Bogdan I, Levine, Stuart S., Slocum, Stephen L., Wogan, Gerald N, Croy, Robert G, Essigmann, John M
Published 2017

H2A.Z Acidic Patch Couples Chromatin Dynamics to Regulation of Gene Expression Programs during ESC Differentiation

by Subramanian, Vidya, Mazumder, Aprotim, Fields, Paul A., Torrey, Lillian, Levine, Stuart S., Bathe, Mark, Surface, Lauren Elizabeth, Alwan, Allison M., Thai, Kevin Kinh, Boyer, Laurie Ann, Butty, Vincent L G
Published 2013

Host proteostasis modulates influenza evolution

by McHugh, Sean M, Lin, Yu-Shan, Phillips, Angela Marie, Gonzalez, Luna O., Nekongo, Emmanuel E, Ponomarenko, Anna, Butty, Vincent L G, Levine, Stuart S., Mirny, Leonid A, Shoulders, Matthew D.
Published 2017

Mediator and cohesin connect gene expression and chromatin architecture

by Kagey, Michael H., Newman, Jamie Jennifer, Bilodeau, Steve, Zhan, Ye, Orlando, David A., van Berkum, Nynke L., Ebmeier, Christopher C., Goossens, Jesse, Rahl, Peter B., Levine, Stuart S., Taatjes, Dylan J., Dekker, Job, Young, Richard A.
Published 2012

Gut Microbiome Perturbations Induced by Bacterial Infection Affect Arsenic Biotransformation

by Lu, Kun, Cable, Peter Hans, Ru, Hongyu, Graffam, Michelle E., Schlieper, Katherine Ann, Bodnar, Wanda M., Wishnok, John S., Styblo, Miroslav, Swenberg, James A., Levine, Stuart S., Abo, Ryan, Fox, James G, Parry, Nicola Maria Anne, Tannenbaum, Steven R
Published 2015

In Vitro Culture, Drug Sensitivity, and Transcriptome of Plasmodium Vivax Hypnozoites

by Gural, Nil, Mancio Silva, Liliana, Miller, Alex B, Galstian, Ani, Butty, Vincent L, Levine, Stuart S, Patrapuvich, Rapatbhorn, Desai, Salil P, Mikolajczak, Sebastian A, Kappe, Stefan H. I., Fleming, Heather, March-Riera, Sandra, Sattabongkot, Jetsumon, Bhatia, Sangeeta N
Published 2019

A single-cell liver atlas of Plasmodium vivax infection

by Mancio-Silva, Liliana, Gural, Nil, Real, Eliana, Wadsworth, Marc H, Butty, Vincent L, March, Sandra, Nerurkar, Niketa, Hughes, Travis K, Roobsoong, Wanlapa, Fleming, Heather E, Whittaker, Charlie A, Levine, Stuart S, Sattabongkot, Jetsumon, Shalek, Alex K, Bhatia, Sangeeta N
Published 2022

Next-generation sequencing reveals the biological significance of the N[superscript 2],3-ethenoguanine lesion in vivo

by Chang, Shiou-chi, Wu, Jie, Delaney, James C., Li, Deyu, Zhao, Linlin, Christov, Plamen P., Yau, Emily, Singh, Vipender, Jost, Marco, Marnett, Lawrence J., Rizzo, Carmelo J., Levine, Stuart S., Guengerich, F. Peter, Essigmann, John M., Drennan, Catherine L, Fedeles, Bogdan I
Published 2015

Single-cell transcriptomic profiling of the aging mouse brain

by Ximerakis, Methodios, Lipnick, Scott L., Innes, Brendan T., Simmons, Sean Kenneth, Adiconis, Xian, Dionne, Danielle, Mayweather, Brittany A., Nguyen, Lan, Niziolek, Zachary, Ozek, Ceren, Butty, Vincent, Isserlin, Ruth, Buchanan, Sean M., Levine, Stuart S., Regev, Aviv, Bader, Gary D., Levin, Joshua Z., Rubin, Lee L.
Published 2020

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

by Cao, Bo, Chen, Chao, DeMott, Michael S., Cheng, Qiuxiang, Clark, Tyson A., Xiong, Xiaolin, Zheng, Xiaoqing, Levine, Stuart S., Yuan, George, Boitano, Matthew, Luong, Khai, Song, Yi, Zhou, Xiufen, Deng, Zixin, Turner, Stephen W., Korlach, Jonas, You, Delin, Wang, Lianrong, Chen, Shi, Butty, Vincent L G, Dedon, Peter C
Published 2015