Dissecting genomic diversity, one cell at a time

by Blainey, Paul C, Quake, Stephen R
Published 2017

Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples

by Yu, Feiqiao Brian, Schulz, Frederik, Woyke, Tanja, Horowitz, Mark A, Quake, Stephen R, Blainey, Paul C
Published 2018

Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage

by Dodsworth, Jeremy A., Blainey, Paul C., Murugapiran, Senthil K., Swingley, Wesley D., Ross, Christian A., Tringe, Susannah G., Chain, Patrick S. G., Scholz, Matthew B., Lo, Chien-Chi, Raymond, Jason, Quake, Stephen R., Hedlund, Brian P.
Published 2016

Tools for the Microbiome: Nano and Beyond

by Biteen, Julie S., Cardon, Zoe G., Chun, Miyoung, Church, George M., Dorrestein, Pieter C., Fraser, Scott E., Gilbert, Jack A., Jansson, Janet K., Knight, Rob, Miller, Jeff F., Ozcan, Aydogan, Prather, Kimberly A., Quake, Stephen R., Ruby, Edward G., Silver, Pamela A., Taha, Sharif, van den Engh, Ger, Weiss, Paul S., Wong, Gerard C. L., Wright, Aaron T., Young, Thomas D., Blainey, Paul C
Published 2017

The Human Cell Atlas

by Teichmann, Sarah A, Amit, Ido, Benoist, Christophe, Birney, Ewan, Bodenmiller, Bernd, Campbell, Peter, Carninci, Piero, Clatworthy, Menna, Clevers, Hans, Deplancke, Bart, Dunham, Ian, Eberwine, James, Eils, Roland, Enard, Wolfgang, Farmer, Andrew, Fugger, Lars, Göttgens, Berthold, Hacohen, Nir, Haniffa, Muzlifah, Hemberg, Martin, Kim, Seung, Klenerman, Paul, Kriegstein, Arnold, Lein, Ed, Linnarsson, Sten, Lundberg, Emma, Lundeberg, Joakim, Majumder, Partha, Marioni, John C, Merad, Miriam, Mhlanga, Musa, Nawijn, Martijn, Netea, Mihai, Nolan, Garry, Pe'er, Dana, Phillipakis, Anthony, Ponting, Chris P, Quake, Stephen, Reik, Wolf, Rozenblatt-Rosen, Orit, Sanes, Joshua, Satija, Rahul, Schumacher, Ton N, Shalek, Alex, Shapiro, Ehud, Sharma, Padmanee, Shin, Jay W, Stegle, Oliver, Stratton, Michael, Stubbington, Michael J T, Theis, Fabian J, Uhlen, Matthias, van Oudenaarden, Alexander, Wagner, Allon, Watt, Fiona, Weissman, Jonathan, Wold, Barbara, Xavier, Ramnik, Yosef, Nir, Regev, Aviv, Lander, Eric Steven
Published 2018

Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity

by Bui, Linh T., Winters, Nichelle I., Chung, Mei-I, Joseph, Chitra, Gutierrez, Austin J., Habermann, Arun C., Adams, Taylor S., Schupp, Jonas C., Poli, Sergio, Peter, Lance M., Taylor, Chase J., Blackburn, Jessica B., Richmond, Bradley W., Nicholson, Andrew G., Rassl, Doris, Wallace, William A., Rosas, Ivan O., Jenkins, R. Gisli, Kaminski, Naftali, Kropski, Jonathan A., Banovich, Nicholas E., Misharin, Alexander V., Tsankov, Alexander M., Spira, Avrum, Barbry, Pascal, Brazma, Alvis, Samakovlis, Christos, Shepherd, Douglas P., Rawlins, Emma L., Theis, Fabian J., Griffonnet, Jennifer, Lee, Haeock, Schiller, Herbert B., Hofman, Paul, Powell, Joseph E., Schultze, Joachim L., Whitsett, Jeffrey, Choi, Jiyeon, Lundeberg, Joakim, Kaminski, Naftali, Kropski, Jonathan A., Banovich, Nicholas E., Ordovas-Montanes, Jose, Rajagopal, Jayaraj, Meyer, Kerstin B., Krasnow, Mark A., Saeb‐Parsy, Kourosh, Zhang, Kun, Lafyatis, Robert, Leroy, Sylvie, Haniffa, Muzlifah, Nawijn, Martijn C., Nikolić, Marko Z., van den Berge, Maarten, Kuhnemund, Malte, Marquette, Charles-Hugo, Von Papen, Michael, Eickelberg, Oliver, Rosenblatt-Rosen, Orit, Reyfman, Paul A., Pe'er, Dana, Horvath, Peter, Tata, Purushothama Rao, Regev, Aviv, Rojas, Mauricio, Seibold, Max A., Shalek, Alex K., Spence, Jason R., Teichmann, Sarah A., Quake, Stephen, Duong, Thu Elizabeth, Biancalani, Tommaso, Desai, Tushar, Sun, Xin, Zaragosi, Laure Emmanuelle
Published 2022