PD-1 blockade in chronically HIV-1-infected humanized mice suppresses viral loads.

by Edward Seung, Timothy E Dudek, Todd M Allen, Gordon J Freeman, Andrew D Luster, Andrew M Tager
Published 2013-01-01

Early type I Interferon response induces upregulation of human β-defensin 1 during acute HIV-1 infection.

by Björn Corleis, Antonella C Lisanti, Christian Körner, Abigail E Schiff, Eric S Rosenberg, Todd M Allen, Marcus Altfeld, Douglas S Kwon
Published 2017-01-01

Increased breadth and depth of cytotoxic T lymphocytes responses against HIV-1-B Nef by inclusion of epitope variant sequences.

by Morgane Rolland, Nicole Frahm, David C Nickle, Nebojsa Jojic, Wenjie Deng, Todd M Allen, Christian Brander, David E Heckerman, James I Mullins
Published 2011-03-01

Lower Broadly Neutralizing Antibody Responses in Female Versus Male HIV-1 Infected Injecting Drug Users

by Zelda EULER, Tom L. VAN DEN KERKHOF, Roger D. KOUYOS, Damien C. TULLY, Todd M. ALLEN, Alexandra TRKOLA, Rogier W. SANDERS, Hanneke SCHUITEMAKER, Marit J. VAN GILS
Published 2019-04-01

Use of Dried Blood Spots to Elucidate Full-Length Transmitted/Founder HIV-1 Genomes

by Jesus F. Salazar-Gonzalez, Maria G. Salazar, Damien C. Tully, Colin B. Ogilvie, Gerald H. Learn, Todd M. Allen, Sonya L. Heath, Paul Goepfert, Katharine J. Bar
Published 2016-07-01

Gp41-targeted antibodies restore infectivity of a fusion-deficient HIV-1 envelope glycoprotein.

by Vinita R Joshi, Ruchi M Newman, Melissa L Pack, Karen A Power, James B Munro, Ken Okawa, Navid Madani, Joseph G Sodroski, Aaron G Schmidt, Todd M Allen
Published 2020-05-01

Antigen load and viral sequence diversification determine the functional profile of HIV-1-specific CD8+ T cells.

by Hendrik Streeck, Zabrina L Brumme, Michael Anastario, Kristin W Cohen, Jonathan S Jolin, Angela Meier, Chanson J Brumme, Eric S Rosenberg, Galit Alter, Todd M Allen, Bruce D Walker, Marcus Altfeld
Published 2008-05-01

Hepatitis C Virus Transmission Clusters in Public Health and Correctional Settings, Wisconsin, USA, 2016–2017

by Karli R. Hochstatter, Damien C. Tully, Karen A. Power, Ruth Koepke, Wajiha Z. Akhtar, Audrey F. Prieve, Thomas Whyte, David J. Bean, David W. Seal, Todd M. Allen, Ryan P. Westergaard
Published 2021-02-01

A novel immunodominant CD8+ T cell response restricted by a common HLA-C allele targets a conserved region of Gag HIV-1 clade CRF01_AE infected Thais.

by Supranee Buranapraditkun, Ursula Hempel, Patrawadee Pitakpolrat, Rachel L Allgaier, Pattarawat Thantivorasit, Sven-Iver Lorenzen, Sunee Sirivichayakul, William H Hildebrand, Marcus Altfeld, Christian Brander, Bruce D Walker, Praphan Phanuphak, Pokrath Hansasuta, Sarah L Rowland-Jones, Todd M Allen, Kiat Ruxrungtham
Published 2011-01-01

Innate Immune Reconstitution in Humanized Bone Marrow-Liver-Thymus (HuBLT) Mice Governs Adaptive Cellular Immune Function and Responses to HIV-1 Infection

by Wilfredo F. Garcia-Beltran, Daniel T. Claiborne, Colby R. Maldini, Meredith Phelps, Vladimir Vrbanac, Marshall E. Karpel, Marshall E. Karpel, Katharine L. Krupp, Karen A. Power, Christian L. Boutwell, Alejandro B. Balazs, Andrew M. Tager, Marcus Altfeld, Todd M. Allen
Published 2021-05-01

Impaired hepatitis C virus-specific T cell responses and recurrent hepatitis C virus in HIV coinfection.

by Arthur Y Kim, Julian Schulze zur Wiesch, Thomas Kuntzen, Joerg Timm, Daniel E Kaufmann, Jared E Duncan, Andrea M Jones, Alysse G Wurcel, Benjamin T Davis, Rajesh T Gandhi, Gregory K Robbins, Todd M Allen, Raymond T Chung, Georg M Lauer, Bruce D Walker
Published 2006-12-01

HLA Alleles Associated with Delayed Progression to AIDS Contribute Strongly to the Initial CD8(+) T Cell Response against HIV-1.

by Marcus Altfeld, Elizabeth T Kalife, Ying Qi, Hendrik Streeck, Mathias Lichterfeld, Mary N Johnston, Nicole Burgett, Martha E Swartz, Amy Yang, Galit Alter, Xu G Yu, Angela Meier, Juergen K Rockstroh, Todd M Allen, Heiko Jessen, Eric S Rosenberg, Mary Carrington, Bruce D Walker
Published 2006-10-01

Highly sensitive and specific detection of rare variants in mixed viral populations from massively parallel sequence data.

by Alexander R Macalalad, Michael C Zody, Patrick Charlebois, Niall J Lennon, Ruchi M Newman, Christine M Malboeuf, Elizabeth M Ryan, Christian L Boutwell, Karen A Power, Doug E Brackney, Kendra N Pesko, Joshua Z Levin, Gregory D Ebel, Todd M Allen, Bruce W Birren, Matthew R Henn
Published 2012-01-01

Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus.

by Damien C Tully, Colin B Ogilvie, Rebecca E Batorsky, David J Bean, Karen A Power, Musie Ghebremichael, Hunter E Bedard, Adrianne D Gladden, Aaron M Seese, Molly A Amero, Kimberly Lane, Graham McGrath, Suzane B Bazner, Jake Tinsley, Niall J Lennon, Matthew R Henn, Zabrina L Brumme, Philip J Norris, Eric S Rosenberg, Kenneth H Mayer, Heiko Jessen, Sergei L Kosakovsky Pond, Bruce D Walker, Marcus Altfeld, Jonathan M Carlson, Todd M Allen
Published 2016-05-01

A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control

by István Bartha, Jonathan M Carlson, Chanson J Brumme, Paul J McLaren, Zabrina L Brumme, Mina John, David W Haas, Javier Martinez-Picado, Judith Dalmau, Cecilio López-Galíndez, Concepción Casado, Andri Rauch, Huldrych F Günthard, Enos Bernasconi, Pietro Vernazza, Thomas Klimkait, Sabine Yerly, Stephen J O’Brien, Jennifer Listgarten, Nico Pfeifer, Christoph Lippert, Nicolo Fusi, Zoltán Kutalik, Todd M Allen, Viktor Müller, P Richard Harrigan, David Heckerman, Amalio Telenti, Jacques Fellay, for the HIV Genome-to-Genome Study and the Swiss HIV Cohort Study
Published 2013-10-01

Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection.

by Matthew R Henn, Christian L Boutwell, Patrick Charlebois, Niall J Lennon, Karen A Power, Alexander R Macalalad, Aaron M Berlin, Christine M Malboeuf, Elizabeth M Ryan, Sante Gnerre, Michael C Zody, Rachel L Erlich, Lisa M Green, Andrew Berical, Yaoyu Wang, Monica Casali, Hendrik Streeck, Allyson K Bloom, Tim Dudek, Damien Tully, Ruchi Newman, Karen L Axten, Adrianne D Gladden, Laura Battis, Michael Kemper, Qiandong Zeng, Terrance P Shea, Sharvari Gujja, Carmen Zedlack, Olivier Gasser, Christian Brander, Christoph Hess, Huldrych F Günthard, Zabrina L Brumme, Chanson J Brumme, Suzane Bazner, Jenna Rychert, Jake P Tinsley, Ken H Mayer, Eric Rosenberg, Florencia Pereyra, Joshua Z Levin, Sarah K Young, Heiko Jessen, Marcus Altfeld, Bruce W Birren, Bruce D Walker, Todd M Allen
Published 2012-01-01