In-depth resistome analysis by targeted metagenomics

In-depth resistome analysis by targeted metagenomics

Abstract Background Antimicrobial resistance is a major global health challenge. Metagenomics allows analyzing the presence and dynamics of “resistomes” (the ensemble of genes encoding antimicrobial resistance in a given microbiome) in disparate microbial ecosystems. However, the low sensitivity and...

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Bibliographic Details
Main Authors: Val F. Lanza, Fernando Baquero, José Luís Martínez, Ricardo Ramos-Ruíz, Bruno González-Zorn, Antoine Andremont, Antonio Sánchez-Valenzuela, Stanislav Dusko Ehrlich, Sean Kennedy, Etienne Ruppé, Willem van Schaik, Rob J. Willems, Fernando de la Cruz, Teresa M. Coque
Format: Article
Language:English
Published: BMC 2018-01-01
Series:Microbiome
Subjects:
Antimicrobial resistance
Resistome
Metagenomics
Differential abundance analysis
Targeted metagenomics
Online Access:http://link.springer.com/article/10.1186/s40168-017-0387-y

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