Super-STORM: Molecular Modeling to Achieve Single-molecule Localization with STORM Microscopy

by Zhichao Fan, Zbigniew Mikulski, Sara McArdle, Prithu Sundd, Klaus Ley
Published 2020-06-01

Human T Cell Response to Dengue Virus Infection

by Yuan Tian, Alba Grifoni, Alessandro Sette, Alessandro Sette, Daniela Weiskopf
Published 2019-09-01

Benchmark datasets of immune receptor-epitope structural complexes

by Swapnil Mahajan, Zhen Yan, Martin Closter Jespersen, Kamilla Kjærgaard Jensen, Paolo Marcatili, Morten Nielsen, Alessandro Sette, Bjoern Peters
Published 2019-10-01

Recent advances in mast cell activation and regulation [version 1; peer review: 2 approved]

by Hwan Soo Kim, Yu Kawakami, Kazumi Kasakura, Toshiaki Kawakami
Published 2020-03-01

Vaccine genetics of IGHV1-2 VRC01-class broadly neutralizing antibody precursor naïve human B cells

by Jeong Hyun Lee, Laura Toy, Justin T. Kos, Yana Safonova, William R. Schief, Colin Havenar-Daughton, Corey T. Watson, Shane Crotty
Published 2021-09-01

Roles of TET and TDG in DNA demethylation in proliferating and non-proliferating immune cells

by Atsushi Onodera, Edahí González-Avalos, Chan-Wang Jerry Lio, Romain O. Georges, Alfonso Bellacosa, Toshinori Nakayama, Anjana Rao
Published 2021-06-01

Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representation

by Abbas Roayaei Ardakany, Halil Tuvan Gezer, Stefano Lonardi, Ferhat Ay
Published 2020-09-01

Major Histocompatibility Complex Binding, Eluted Ligands, and Immunogenicity: Benchmark Testing and Predictions

by Sinu Paul, Alba Grifoni, Bjoern Peters, Bjoern Peters, Alessandro Sette, Alessandro Sette
Published 2020-02-01

Regulatory T Cell Stability and Plasticity in Atherosclerosis

by Amal J. Ali, Jeffrey Makings, Klaus Ley
Published 2020-12-01

Macrophage Polarization: Different Gene Signatures in M1(LPS+) vs. Classically and M2(LPS–) vs. Alternatively Activated Macrophages

by Marco Orecchioni, Yanal Ghosheh, Akula Bala Pramod, Klaus Ley, Klaus Ley
Published 2019-05-01

NetTCR-2.0 enables accurate prediction of TCR-peptide binding by using paired TCRα and β sequence data

by Alessandro Montemurro, Viktoria Schuster, Helle Rus Povlsen, Amalie Kai Bentzen, Vanessa Jurtz, William D. Chronister, Austin Crinklaw, Sine R. Hadrup, Ole Winther, Bjoern Peters, Leon Eyrich Jessen, Morten Nielsen
Published 2021-09-01

IgE and T Cell Reactivity to a Comprehensive Panel of Cockroach Allergens in Relation to Disease

by Anna Pomés, Véronique Schulten, Jill Glesner, Ricardo da Silva Antunes, Aaron Sutherland, Leonard B. Bacharier, Leonard B. Bacharier, Avraham Beigelman, Avraham Beigelman, Paula Busse, April Frazier, Alessandro Sette, Alessandro Sette
Published 2021-02-01

The Cancer Epitope Database and Analysis Resource: A Blueprint for the Establishment of a New Bioinformatics Resource for Use by the Cancer Immunology Community

by Zeynep Koşaloğlu-Yalçın, Nina Blazeska, Hannah Carter, Hannah Carter, Morten Nielsen, Morten Nielsen, Ezra Cohen, Donald Kufe, Jose Conejo-Garcia, Jose Conejo-Garcia, Paul Robbins, Stephen P. Schoenberger, Bjoern Peters, Bjoern Peters, Alessandro Sette, Alessandro Sette
Published 2021-08-01

Variability in German Cockroach Extract Composition Greatly Impacts T Cell Potency in Cockroach-Allergic Donors

by Giovanni Birrueta, April Frazier, Anna Pomés, Jill Glesner, Stephanie Filep, Coby Schal, Kyoung Yong Jeong, Curtis McMurtrey, Curtis McMurtrey, Thomas Vander Schans, William H. Hildebrand, Paula Busse, Avraham Beigelman, Leonard B. Bacharier, Bjoern Peters, Bjoern Peters, Alessandro Sette, Alessandro Sette, Véronique Schulten
Published 2019-02-01

PopCover-2.0. Improved Selection of Peptide Sets With Optimal HLA and Pathogen Diversity Coverage

by Jonas Birkelund Nilsson, Alba Grifoni, Alison Tarke, Alison Tarke, Alison Tarke, Alessandro Sette, Morten Nielsen
Published 2021-08-01

Conserved epitopes with high HLA-I population coverage are targets of CD8+ T cells associated with high IFN-γ responses against all dengue virus serotypes

by Thiruni N. Adikari, Francesca Di Giallonardo, Preston Leung, Alba Grifoni, Alex Sette, Daniela Weiskopf, Rowena A. Bull, Fabio Luciani
Published 2020-11-01

Repeated exposure to dengue virus elicits robust cross neutralizing antibodies against Zika virus in residents of Northeastern Thailand

by Sararat Hattakam, Annie Elong Ngono, Melanie McCauley, Sujan Shresta, Montarop Yamabhai
Published 2021-05-01

Immune Memory in Mild COVID-19 Patients and Unexposed Donors Reveals Persistent T Cell Responses After SARS-CoV-2 Infection

by Asgar Ansari, Rakesh Arya, Shilpa Sachan, Someshwar Nath Jha, Anurag Kalia, Anupam Lall, Alessandro Sette, Alessandro Sette, Alba Grifoni, Daniela Weiskopf, Poonam Coshic, Ashok Sharma, Nimesh Gupta
Published 2021-03-01

NSD2 overexpression drives clustered chromatin and transcriptional changes in a subset of insulated domains

by Priscillia Lhoumaud, Sana Badri, Javier Rodriguez-Hernaez, Theodore Sakellaropoulos, Gunjan Sethia, Andreas Kloetgen, MacIntosh Cornwell, Sourya Bhattacharyya, Ferhat Ay, Richard Bonneau, Aristotelis Tsirigos, Jane A. Skok
Published 2019-10-01

The Ability of Zika virus Intravenous Immunoglobulin to Protect From or Enhance Zika Virus Disease

by Amelia K. Pinto, Mariah Hassert, Xiaobing Han, Douglas Barker, Trevor Carnelley, Emilie Branche, Tara L. Steffen, E. Taylor Stone, Elizabeth Geerling, Karla M. Viramontes, Cory Nykiforuk, Derek Toth, Sujan Shresta, Shantha Kodihalli, James D. Brien
Published 2021-09-01