Automated Flow Synthesis of Tumor Neoantigen Peptides for Personalized Immunotherapy

by Truex, Nicholas, Holden, Rebecca Lynn, Wang, Bin-You, Chen, Pu-Guang, Hanna, Stephanie, Hu, Zhuting, Shetty, Keerthi, Olive, Oriol, Neuberg, Donna, Hacohen, Nir, Keskin, Derin B., Ott, Patrick A., Wu, Catherine J., Pentelute, Bradley L.
Published 2020

Nanowire-Mediated Delivery Enables Functional Interrogation of Primary Immune Cells: Application to the Analysis of Chronic Lymphocytic Leukemia

by Shalek, Alex K., Gaublomme, Jellert T., Wang, Lili, Yosef, Nir, Chevrier, Nicolas, Andersen, Mette S., Robinson, Jacob T., Pochet, Nathalie, Neuberg, Donna S., Gertner, Rona S., Amit, Ido, Brown, Jennifer R., Hacohen, Nir, Regev, Aviv, Wu, Catherine J., Park, Hongkun
Published 2013

Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia

by Brown, Jennifer R., Hanna, Megan, Tesar, Bethany, Werner, Lillian, Pochet, Nathalie, Asara, John M., Wang, Yaoyu E., dal Cin, Paola, Fernandes, Stacey M., Thompson, Christina, MacConaill, Laura, Wu, Catherine J., Van de Peer, Yves, Correll, Mick, Regev, Aviv, Neuberg, Donna S., Freedman, Arnold S.
Published 2014

Locally Disordered Methylation Forms the Basis of Intratumor Methylome Variation in Chronic Lymphocytic Leukemia

by Landau, Dan A, Clement, Kendell, Ziller, Michael J, Boyle, Patrick, Fan, Jean, Gu, Hongcang, Stevenson, Kristen, Sougnez, Carrie, Wang, Lili, Li, Shuqiang, Kotliar, Dylan, Zhang, Wandi, Ghandi, Mahmoud, Garraway, Levi, Fernandes, Stacey M, Livak, Kenneth J, Gabriel, Stacey, Gnirke, Andreas, Brown, Jennifer R, Neuberg, Donna, Kharchenko, Peter V, Hacohen, Nir, Getz, Gad, Meissner, Alexander, Wu, Catherine J, Lander, Eric Steven
Published 2017

Evolution and Impact of Subclonal Mutations in Chronic Lymphocytic Leukemia

by Landau, Dan A, Carter, Scott L., Stojanov, Petar, McKenna, Aaron, Stevenson, Kristen, Lawrence, Michael S., Sougnez, Carrie, Stewart, Chip, Sivachenko, Andrey, Wang, Lili, Wan, Youzhong, Zhang, Wandi, Shukla, Sachet A, Vartanov, Alexander, Fernandes, Stacey M., Saksena, Gordon, Cibulskis, Kristian, Tesar, Bethany, Gabriel, Stacey B., Hacohen, Nir, Meyerson, Matthew L., Neuberg, Donna S., Brown, Jennifer R., Getz, Gad, Wu, Catherine J, Lander, Eric Steven
Published 2014

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

by Giannakis, Marios, Mu, Xinmeng Jasmine, Shukla, Sachet A, Qian, Zhi Rong, Cohen, Ofir, Nishihara, Reiko, Bahl, Samira, Cao, Yin, Amin-Mansour, Ali, Yamauchi, Mai, Sukawa, Yasutaka, Stewart, Chip, Rosenberg, Mara, Mima, Kosuke, Inamura, Kentaro, Nosho, Katsuhiko, Nowak, Jonathan A, Lawrence, Michael S, Giovannucci, Edward L, Chan, Andrew T, Ng, Kimmie, Meyerhardt, Jeffrey A, Van Allen, Eliezer M, Getz, Gad, Gabriel, Stacey B, Wu, Catherine J, Fuchs, Charles S, Ogino, Shuji, Garraway, Levi A, Lander, Eric Steven
Published 2018

SF3B1 and Other Novel Cancer Genes in Chronic Lymphocytic Leukemia

by Wang, Lili, Lawrence, Michael S., Wan, Youzhong, Stojanov, Petar, Sougnez, Carrie, Stevenson, Kristen, Werner, Lillian, Sivachenko, Andrey, DeLuca, David S., Zhang, Li, Zhang, Wandi, Vartanov, Alexander R., Fernandes, Stacey M., Goldstein, Natalie R., Folco, Eric G., Cibulskis, Kristian, Tesar, Bethany, Sievers, Quinlan L., Shefler, Erica, Gabriel, Stacey B., Hacohen, Nir, Reed, Robin, Meyerson, Matthew L., Golub, Todd R., Neuberg, Donna S., Brown, Jennifer R., Getz, Gad, Wu, Catherine J., Lander, Eric S., Lander, Eric Steven
Published 2014

Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial

by Keskin, Derin B., Anandappa, Annabelle J., Sun, Jing, Tirosh, Itay, Mathewson, Nathan D., Li, Shuqiang, Oliveira, Giacomo, Giobbie-Hurder, Anita, Felt, Kristen, Gjini, Evisa, Shukla, Sachet A., Hu, Zhuting, Li, Letitia, Le, Phuong M., Allesøe, Rosa L., Richman, Alyssa R., Kowalczyk, Monika S., Abdelrahman, Sara, Geduldig, Jack E., Charbonneau, Sarah, Pelton, Kristine, Iorgulescu, J. Bryan, Elagina, Liudmila, Zhang, Wandi, Olive, Oriol, McCluskey, Christine, Olsen, Lars R., Stevens, Jonathan, Lane, William J., Salazar, Andres M., Daley, Heather, Wen, Patrick Y., Chiocca, E. Antonio, Harden, Maegan, Lennon, Niall, Gabriel, Stacey, Getz, Gad Asher, Lander, Eric Steven, Regev, Aviv, Ritz, Jerome, Neuberg, Donna, Rodig, Scott J., Ligon, Keith L., Suvà, Mario L., Wucherpfennig, Kai W., Hacohen, Nir, Fritsch, Edward F., Livak, Kenneth J., Ott, Patrick A., Wu, Catherine J., Reardon, David A.
Published 2020

Genetic Mechanisms of Immune Evasion in Colorectal Cancer

by Grasso, Catherine S., Giannakis, Marios, Wells, Daniel K., Hamada, Tsuyoshi, Mu, Xinmeng Jasmine, Quist, Michael, Nowak, Jonathan A., Nishihara, Reiko, Qian, Zhi Rong, Inamura, Kentaro, Morikawa, Teppei, Nosho, Katsuhiko, Abril-Rodriguez, Gabriel, Connolly, Charles, Escuin-Ordinas, Helena, Geybels, Milan S., Grady, William M., Hsu, Li, Hu-Lieskovan, Siwen, Huyghe, Jeroen R., Kim, Yeon Joo, Krystofinski, Paige, Leiserson, Mark D.M, Montoya, Dennis J., Nadel, Brian B., Pellegrini, Matteo, Pritchard, Colin C., Puig-Saus, Cristina, Quist, Elleanor H., Raphael, Ben J., Salipante, Stephen J., Shin, Daniel Sanghoon, Shinbrot, Eve, Shirts, Brian, Shukla, Sachet, Stanford, Janet L., Sun, Wei, Tsoi, Jennifer, Upfill-Brown, Alexander, Wheeler, David A., Wu, Catherine J., Yu, Ming, Zaidi, Syed H., Zaretsky, Jesse M., Gabriel, Stacey, Lander, Eric Steven, Garraway, Levi A., Hudson, Thomas J., Fuchs, Charles S., Ribas, Antoni, Ogino, Shuji, Peters, Ulrike
Published 2020

Measuring the predictability of life outcomes with a scientific mass collaboration

by Salganik, Matthew J., Lundberg, Ian, Kindel, Alexander T., Ahearn, Caitlin E., Al-Ghoneim, Khaled, Almaatouq, Abdullah, Altschul, Drew M., Brand, Jennie E., Carnegie, Nicole Bohme, Compton, Ryan James, Datta, Debanjan, Davidson, Thomas, Filippova, Anna, Gilroy, Connor, Goode, Brian J., Jahani, Eaman, Kashyap, Ridhi, Kirchner, Antje, McKay, Stephen, Morgan, Allison C., Pentland, Alex, Polimis, Kivan, Raes, Louis, Rigobon, Daniel E., Roberts, Claudia V., Stanescu, Diana M., Suhara, Yoshihiko, Usmani, Adaner, Wang, Erik H., Adem, Muna, Alhajri, Abdulla, AlShebli, Bedoor, Amin, Redwane, Amos, Ryan B., Argyle, Lisa P., Baer-Bositis, Livia, Buchi, Moritz, Chung, Bo-Ryehn, Eggert, William, Faletto, Gregory, Fan, Zhilin, Freese, Jeremy, Gadgil, Tejomay, Gagne ́, Josh, Gao, Yue, Halpern-Manners, Andrew, Hashim, Sonia P., Hausen, Sonia, He, Guanhua, Higuera, Kimberly, Hogan, Bernie, Horwitz, Ilana M., Hummel, Lisa M., Jain, Naman, Jin, Kun, Jurgens, David, Kaminski, Patrick, Karapetyan, Areg, Kim, E. H., Leizman, Ben, Liu, Naijia, Moser, Malte, Mack, Andrew E., Mahajan, Mayank, Mandell, Noah, Marahrens, Helge, Mercado-Garcia, Diana, Mocz, Viola, Mueller-Gastell, Katariina, Musse, Ahmed, Niu, Qiankun, Nowak, William, Omidvar, Hamidreza, Or, Andrew, Ouyang, Karen, Pinto, Katy M., Porter, Ethan, Porter, Kristin E., Qian, Crystal, Rauf, Tamkinat, Sargsyan, Anahit, Schaffner, Thomas, Schnabel, Landon, Schonfeld, Bryan, Sender, Ben, Tang, Jonathan D., Tsurkov, Emma, van Loon, Austin, Varol, Onur, Wang, Xiafei, Wang, Zhi, Wang, Julia, Wang, Flora, Weissman, Samantha, Whitaker, Kirstie, Wolters, Maria K., Woon, Wei Lee, Wu, James, Wu, Catherine, Yang, Kengran, Yin, Jingwen, Zhao, Bingyu, Zhu, Chenyun, Brooks-Gunn, Jeanne, Engelhardt, Barbara E., Hardt, Moritz, Knox, Dean, Levy, Karen, Narayanan, Arvind, Stewart, Brandon M., Watts, Duncan J., McLanahan, Sara
Published 2021